Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00102 ATGGCCTCCGTCGATGGTCAGATCGTCTGCGTCACCGGCGCCTCCGGCTTCGTTGGCTCCTGGCTCGTCATGCGCCTCCTCCAGCGCGGCTACTCCGTCCGATCTACTGTCCGTGATCCTGAGAATTTGAAGAAGGTGAAGCATTTGCTTGAATTACCGGGGGCAGAGACTCGGTTGTCACTTTGGAAAGCCGATCTTTCTGTTGAAGGGAGCTTTGAGAAGCCAATCAGCGGCTGCCATGGCGTTTTCCACGTTGCTACGCCCATGGATTTTGAGTCTACAGACCCCGACAATGAAGTGATTAAGCCGACGATCAGCGGAATGCTAAGCATAATGAAGGCGTGTAAAGAGGCAAAAACTGTTCGGAGATTGGTGTTTACTTCATCCGCCGGAACTGTTGCTGTTCGAGAAGATCGAAAGCAATTATACGATGAAAACTGTTGGAGTGACGTCGAATTTTGCCGATCGGCAAAGATGACAGGATGGATGTATTTCGTGTCCAAGACATTAGCCGAGCAAGCTGCATGGAAATTTGCTGAAGAACAAAACCTAGATTTCATAAGCATCATACCCACCCTCGTCATCGGCCCATTTCTTATGCCATCAATGCCGCCCAGCTTGATTACTGGACTTTCCCTAATTACCAGAACTGAAAGCCATTATTCTATTACGAAGCAGTGCCAGTATGTTCATCTGGACGACCTTTGCAATGCTCATATATTCTTGTATGAGAACCCTAAAGCCGAAGGCAGATATATTTGTTCCTCTCACAATGCTAATATCCATGATGTCGCAAATCTGCTTAAAGAAAAATACCCAGAATACGATGTTCCGACCCGGTTCGAAGGAATTGAAGAGAACTTGAATCTAATTGAATTCTCTTCAAAAAAGTTGACGGATTTAGGGTTTGAGTTCAAATACAGCTTGGAGGAGATGTTCACAGGTGCAGTTGAAACATGTCGGGCCAAAGGGTTGATCCCTCATGCTTCTGCAATCCATGTCAGCGGCAATGGAAAAGTCTAA 1023 46.63 MASVDGQIVCVTGASGFVGSWLVMRLLQRGYSVRSTVRDPENLKKVKHLLELPGAETRLSLWKADLSVEGSFEKPISGCHGVFHVATPMDFESTDPDNEVIKPTISGMLSIMKACKEAKTVRRLVFTSSAGTVAVREDRKQLYDENCWSDVEFCRSAKMTGWMYFVSKTLAEQAAWKFAEEQNLDFISIIPTLVIGPFLMPSMPPSLITGLSLITRTESHYSITKQCQYVHLDDLCNAHIFLYENPKAEGRYICSSHNANIHDVANLLKEKYPEYDVPTRFEGIEENLNLIEFSSKKLTDLGFEFKYSLEEMFTGAVETCRAKGLIPHASAIHVSGNGKV 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1910808 1912288 - Bpe017490.1 Bpe05g00102 103879

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00102 340 PANTHER DIHYDROFLAVONAL-4-REDUCTASE 2 8 331 - -
Bpe05g00102 340 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 331 - -
Bpe05g00102 340 CDD FR_SDR_e 9 303 - -
Bpe05g00102 340 Gene3D - 3 338 - -
Bpe05g00102 340 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 320 IPR036291 -
Bpe05g00102 340 Pfam NAD dependent epimerase/dehydratase family 9 249 IPR001509 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00102 K13082 DFR; bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [EC:1.1.1.219 1.1.1.234] - zju:107420293 527.709
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00372 Bpe-Chr1:2343109 Bpe05g00102 Bpe-Chr5:1910808 1.39E-104 dispersed
Bpe03g00807 Bpe-Chr3:27997879 Bpe05g00102 Bpe-Chr5:1910808 5.62E-65 dispersed
Bpe05g00102 Bpe-Chr5:1910808 Bpe08g00337 Bpe-Chr8:1993110 6.03E-103 dispersed
Bpe07g00689 Bpe-Chr7:13527973 Bpe05g00102 Bpe-Chr5:1910808 3.67E-81 transposed
Bpe02g01697 Bpe-Chr2:19503593 Bpe05g00102 Bpe-Chr5:1910808 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g974 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo18g00809 Bda08g01275 . . Bpe05g00102 . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001471 4 1 2 1 2 2 1 2 2 1 1 2 2 1 2 2 2 4 2 2 2 4 3 2 2 1 6 4 4 6 72
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe05g00102 Bpe_Chr05 FPKM 75.960716 81.981041 86.188179 84.57769 109.126884 121.78154 103.474037 105.949135 99.201439 98.276436