Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00110 ATGGATTTCTTCAAAGTTCTTCTGGGTTTTATGCTGACACTTTTCTCCTCCACGCTCTCCCAAGCCTTCCCAGGCTTTGATTTTGGTTTTGGGTGGGGTGGTAGTGGTAATATAGGCAATGGCGGAGGTTACAATGGTCTGTTTCCTCAATACTATCAGTTCTCATGCCCTCAAGTGAATGACATTGTTATGTCTGTTTTGGAGAAGGCAATTGCACAGGAGCCTAGAATGGCTGCCTCTTTACTCAGACTTCACTTTCACGACTGCTTTGCTCAGGGCTGCGATGCGTCTGTACTGCTGGATAATAGCGCCATTATTAACAGTGAGAAGAATTCTTTGCCAAACAGAAACTCCATTAGAGGGTTTCAAGTGCTGGACGAGATCAAGGCTAGACTGGAAGAGGAATGCCCTCAGACAGTTTCCTGTGCTGACATTCTAGCATTGGCTGCCCGTGGCTCTACTCTTCTGAGCGGAGGGCCATCTTGGGAGCTTCCACTCGGCAGAAAGGACTCAAAAACAGCAAGTGTTAGCCTCTCAAACAACAATATTCCAGCCCCAAATTCCACCGTTCCGAACCTCGTAAACTTGTTCAAACGTCAAGGCCTTGATGAAGTAGACCTCGTTGCTCTTTCAGGTGGACATACAATTGGGGTGGCGAGGTGTGTGACGTTCAAGCAGAGGCTGTACAATCAAAATGGAAACAACGAACCAGACGAGACGCTTGAAAGAAGCTACTACTTTGGACTGAAATCAATCTGCCCAAGAACTGGCGGAGACAACAACATTTCTCCGCTGGACTTTGCCTCTCCTGTCAGATTCGACAACACCTATTTCAAGCTCATCCTGTGGGGAAAAGGGCTCCTCAATTCAGACCAAGTCCTCTTCACAGGAAATGATGCCAAGACGACGGAGTTGGTCAAGGTTTATGCAGAGAACGAGAGCTTGTTCTTCGAGCAGTTTGCTAAATCTATGGTGAAGATGGGAAATATAAGCCCTCTGGTAGGGTTTAATGGAGAAGTCAGGAAGAACTGTCGCAGGGTTAACTGA 1047 47.09 MDFFKVLLGFMLTLFSSTLSQAFPGFDFGFGWGGSGNIGNGGGYNGLFPQYYQFSCPQVNDIVMSVLEKAIAQEPRMAASLLRLHFHDCFAQGCDASVLLDNSAIINSEKNSLPNRNSIRGFQVLDEIKARLEEECPQTVSCADILALAARGSTLLSGGPSWELPLGRKDSKTASVSLSNNNIPAPNSTVPNLVNLFKRQGLDEVDLVALSGGHTIGVARCVTFKQRLYNQNGNNEPDETLERSYYFGLKSICPRTGGDNNISPLDFASPVRFDNTYFKLILWGKGLLNSDQVLFTGNDAKTTELVKVYAENESLFFEQFAKSMVKMGNISPLVGFNGEVRKNCRRVN 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2132998 2134366 + Bpe017497.1 Bpe05g00110 103887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00110 348 ProSitePatterns Peroxidases active site signature. 78 89 IPR019794 GO:0004601
Bpe05g00110 348 PRINTS Plant peroxidase signature 56 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe05g00110 348 PRINTS Plant peroxidase signature 205 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe05g00110 348 PRINTS Plant peroxidase signature 158 173 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe05g00110 348 PRINTS Plant peroxidase signature 120 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe05g00110 348 PRINTS Plant peroxidase signature 139 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe05g00110 348 PRINTS Plant peroxidase signature 264 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe05g00110 348 PRINTS Plant peroxidase signature 322 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe05g00110 348 PRINTS Plant peroxidase signature 80 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe05g00110 348 PRINTS Plant peroxidase signature 280 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe05g00110 348 ProSiteProfiles Plant heme peroxidase family profile. 46 348 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe05g00110 348 SUPERFAMILY Heme-dependent peroxidases 47 348 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bpe05g00110 348 Pfam Peroxidase 65 312 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe05g00110 348 PRINTS Haem peroxidase superfamily signature 140 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe05g00110 348 PRINTS Haem peroxidase superfamily signature 78 92 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe05g00110 348 PRINTS Haem peroxidase superfamily signature 266 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe05g00110 348 PRINTS Haem peroxidase superfamily signature 158 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe05g00110 348 PRINTS Haem peroxidase superfamily signature 206 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe05g00110 348 PANTHER PEROXIDASE 72-RELATED 47 347 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe05g00110 348 CDD secretory_peroxidase 47 347 IPR033905 GO:0004601|GO:0042744
Bpe05g00110 348 Gene3D - 51 348 - -
Bpe05g00110 348 Gene3D Peroxidase, domain 2 184 327 - -
Bpe05g00110 348 PANTHER PEROXIDASE 9 47 347 - -
Bpe05g00110 348 ProSitePatterns Peroxidases proximal heme-ligand signature. 206 216 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00110 Bpe-Chr5:2132998 Bpe13g00431 Bpe-Chr13:11897912 2.44E-143 dispersed
Bpe10g00285 Bpe-Chr10:10236516 Bpe05g00110 Bpe-Chr5:2132998 4.66E-79 dispersed
Bpe13g00175 Bpe-Chr13:9623926 Bpe05g00110 Bpe-Chr5:2132998 1.25E-91 dispersed
Bpe05g00110 Bpe-Chr5:2132998 Bpe15g01196 Bpe-Chr15:20725853 6.21E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00110 K00430 - tcc:18591452 543.888