Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00122 ATGAATCTGCTGCGATCGGAGCCGATGCAGTTGGTGCAACTTATAATTCCCATTGAATCAGCGTACCGGACGATCGCTTACCTTGGCGACCTCGGTCTCTTTCAGCTCAAAGATCTCAATACAAGCAAAAGCCCATTCCAGAGGACATATGCGGCGCAGGTGTGTCATAATATTTTTGAGTTTCCACGTTCTCCTTTTCCCTTTATGTTTGTATATGCATATTTCTTTACCAAGCAGATCAAAAGATGTGGAGAAATGTCTCGCAAACTCCGTCTCTTCAAGGAGCAAATGATGAAGGCTGGTTTAATGCTCTCAAAAATGTCTACGAAAGGCATGGATATTGATCTGGATAACTTGGAGATGAAACTCGGAGAATTTGAATCTGAGTTGCGGGAGATAAATTCGAACAATGAAAAGTTACAGAAAAGTTATAGGGAGCTGTTAGAATATAAACTTATTCTTCAAAAGGCTGGAGAATTTTTTCATTCAGCTCAAAATATTGTTGCAAGTCAGAATAGAGAATTTTCAGGGCAATACAATGGTGAAGGGTCCATTGACAGCCCACTTTTGATGGAACAAGAGTTTATGACAGATTCGACGAAGCATGTTAAGCTTGGATTTATAAGTGGGCTAGTTCAAAAGAATAAGTCATTGGCTTTTGAAAGAATTTTGTTTCGAGCAACCAGGGGTAATGTGTTTTTGCGGCAATCTATGATTGAAGATCCTATAACTGATCCTGGATCAGGAGAGAAGGTTGAGAAAAATGTATTTGTCATCTTCTACTCTGGAGAAATACCAAGGAACAAAGTTTTAAAAATATGTGAAGCTTTTGGGGCAAACCTCTACGCATTTCCTGATGATTTAAACAGACAGCCTCTGATGCTCATTGAGGTGTCTAAAAAAATTTCTGAGCTAAAGAGAACAATCGAAGTTGGGCTTCTTCATCAGAGAAATTTGTTGCAGACGATTGACTACCAATATGAGCAGTGGCATCTTTTGGTTTGTTCAAACTGTTTATTTCCTACTCTAAGAATTCTTACTAGTCTTTGCCTCGTATATTTATATATAAACTATAAATTGTTATACCTTCATATTCAGAAAGCAATTCAACGGGCAACTTTTGACAGCAACTCACCGATTGGATCCATATTCCAGGTTTTGCAGTCAAAAGAAATGCCCCCTACATATTTTCGGACAAACAAATTTACTTCTGCTTTTCAAGAAATTGTTGATGCATATGGGGTTGCAAGGTATCAGGAAGTAAATCCTGGAGTCTTCACAGTCATCACGTTCCCTTTCCTTTTTGCTGTAATGTTTGGTGATTGGGGACATGGTATATGCTTGTTGATATCGGCACTGTATTTTATATCCAGAGAGAAGAAATTTTCTAGTCAGAAACTTGGAGATATCATAGAAATGACCTTTGGAGGCCGTTATGTTATCATGATGATGGCACTATTTTCAATATACACAGGACCAGTATACAATGAATTTTTTTCTGTTCCACTTGAGCTATTTGGTCCCTCGGCATATGGATGTGGTGACCCCTCCTGCAGAGACATGACTACAGTGGGTGTGATAAAGATGCGCGACACTTACCCGTTTGGTTTGGACCCTAAGTGGCATGGTACAAGGAGTGAGTTACCATTTCTCAATTCACTCAAGATGAAGATGTCAATTCTCTTGGGAGTAGCACAAATGAATCTTGGAATCATATTAAGCTACTTCAACGCAAAATTCTTTGGAGACAACATAAATATCTGGTATCAATTTGTTCCCCAGATGATCTTTTTGAACAGCTTATTTGGCTATCTCTCACTTCTCATAATTGTAAAATGGTGCTCTGGCTCTCAAGCTGATTTATATCACAGACACCAAGGTCAATCTTACATGTTGCTTCACCTGGCTGATGACCCTCTTGAAGCGGAGCCATATAATGATTCCAATAACCATGAAGAATTTGAGTTCAGTGAGATCTTCGTACACCAACTTATACATACCATAGAGTTTGTCCTTGGAGCTGTTTCTAATACCGCATCATACTTAAGACTATGGGCACTCAGTTTGGCACATTCAGAATTATCGAGTGTGTTTTATGACAAAGTTCTACTTCTGGCTTGGGGGTTCGACAGTGTTATCATTCTTATTGTTGGGATAGCTGTTTTTATTTTTGCGACTGTTGGCGTTCTTCTGGTGATGGAAACGCTCAGTGCATTCCTACATGCTTTGCGGTTGCACTGGGTTGAGTTTCAGAACAAGTTCTACGAAGGAAATGGTTTCAAATTTTACCCTTTTTCATTTGCATTACTTCAAGATGAAGACAAT 2325 39.05 MNLLRSEPMQLVQLIIPIESAYRTIAYLGDLGLFQLKDLNTSKSPFQRTYAAQVCHNIFEFPRSPFPFMFVYAYFFTKQIKRCGEMSRKLRLFKEQMMKAGLMLSKMSTKGMDIDLDNLEMKLGEFESELREINSNNEKLQKSYRELLEYKLILQKAGEFFHSAQNIVASQNREFSGQYNGEGSIDSPLLMEQEFMTDSTKHVKLGFISGLVQKNKSLAFERILFRATRGNVFLRQSMIEDPITDPGSGEKVEKNVFVIFYSGEIPRNKVLKICEAFGANLYAFPDDLNRQPLMLIEVSKKISELKRTIEVGLLHQRNLLQTIDYQYEQWHLLVCSNCLFPTLRILTSLCLVYLYINYKLLYLHIQKAIQRATFDSNSPIGSIFQVLQSKEMPPTYFRTNKFTSAFQEIVDAYGVARYQEVNPGVFTVITFPFLFAVMFGDWGHGICLLISALYFISREKKFSSQKLGDIIEMTFGGRYVIMMMALFSIYTGPVYNEFFSVPLELFGPSAYGCGDPSCRDMTTVGVIKMRDTYPFGLDPKWHGTRSELPFLNSLKMKMSILLGVAQMNLGIILSYFNAKFFGDNINIWYQFVPQMIFLNSLFGYLSLLIIVKWCSGSQADLYHRHQGQSYMLLHLADDPLEAEPYNDSNNHEEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFDSVIILIVGIAVFIFATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGNGFKFYPFSFALLQDEDN 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2534292 2546845 - Bpe025790 Bpe05g00122 103899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00122 775 Coils Coil 116 150 - -
Bpe05g00122 775 PIRSF ATP6V0A1 624 775 IPR026028 GO:0000220|GO:0046961
Bpe05g00122 775 PIRSF ATP6V0A1 69 631 IPR026028 GO:0000220|GO:0046961
Bpe05g00122 775 PIRSF ATP6V0A1 1 58 IPR026028 GO:0000220|GO:0046961
Bpe05g00122 775 Pfam V-type ATPase 116kDa subunit family 76 620 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bpe05g00122 775 Pfam V-type ATPase 116kDa subunit family 643 767 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bpe05g00122 775 PANTHER VACUOLAR PROTON ATPASES 1 55 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bpe05g00122 775 PANTHER VACUOLAR PROTON ATPASES 624 775 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bpe05g00122 775 PANTHER VACUOLAR PROTON ATPASES 75 623 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bpe05g00122 775 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 624 775 - -
Bpe05g00122 775 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 75 623 - -
Bpe05g00122 775 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 1 55 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00122 Bpe-Chr5:2534292 Bpe08g00136 Bpe-Chr8:724956 0 dispersed
Bpe12g00089 Bpe-Chr12:639661 Bpe05g00122 Bpe-Chr5:2534292 0 wgd
Bpe15g00852 Bpe-Chr15:18514200 Bpe05g00122 Bpe-Chr5:2534292 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00122 K02154 - qsu:111995652 1095.88