Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00123 ATGGCTAATTTTTTCTATCTAGGCGGTAGAGAACAAGATCCACGAAACAAGGAAAGCGAAGGAGAAGAAGAAGATCAGAGGGCGCAAAACCTATATTTATACAGACAAGAAGAGATCTACAACAAGGGTTTCGAGATATGGCCTCAGCACAATCAGCAAAACATGAGCAACTACTTGTCTTTCGGAGTGGGTCCGAGCCGAAGAAACTTCATGAATGTCTCTGAGAACAATTCATCAAGATCAGGAGGAGGGGTTAATTGCCAAGACTGTGGAAATCAAGCCAAGAAAGACTGTTCTTATTTGAGGTGTAGAACTTGTTGCAAAAGCAGAGGGTTTCAATGTCAAACCCACGTCAGAAGCACGTGGGTTCCGGCTGCTAAACGCCGGGAGAGGCAGCAGCAACTTGCGGCCTTGCATTGTCAACCGCCGGAAGAGCCACCACAGCCTCGTGCAGGAGAGAATACGAAAAAGATTAGGGAGCTTCAGGTGGGAGGTTCTTCTTCTCTTGCCGCCTCTCGGTTAGAGCTGACGCAGTTTCCAGCTGAAGTGAATTCCCCAGCCGTGTTTCGCTGCGTAAAAGTCAGCCAAGTATATGACGCAGATGAACAGTTTGCATATCAGACGGCTGTAAGCATCGGCGGACATGTTTTCAAAGGAATTCTTTATGACCAAGGCCCAGAAAGTCGTTACGCCGGCGGGGGTGTTGAAAGCTCGTCCGTCCACGGTGCAGATGGATCTCAGCAACTTAATCTTATTACAGGACCCTCCTGCACCATAGCCACTGCAACTACTAGTAATCCTTCTGCTACAATGCTAGACCCTTCTCTATATCCAGCTCCCCTTACTGCATTCATAGCTGGTACGCAATTCTTCCCACCTTCAAGGCCATGA 891 48.15 MANFFYLGGREQDPRNKESEGEEEDQRAQNLYLYRQEEIYNKGFEIWPQHNQQNMSNYLSFGVGPSRRNFMNVSENNSSRSGGGVNCQDCGNQAKKDCSYLRCRTCCKSRGFQCQTHVRSTWVPAAKRRERQQQLAALHCQPPEEPPQPRAGENTKKIRELQVGGSSSLAASRLELTQFPAEVNSPAVFRCVKVSQVYDADEQFAYQTAVSIGGHVFKGILYDQGPESRYAGGGVESSSVHGADGSQQLNLITGPSCTIATATTSNPSATMLDPSLYPAPLTAFIAGTQFFPPSRP 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2598777 2600131 + Bpe017507.1 Bpe05g00123 103900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00123 296 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 293 - -
Bpe05g00123 296 MobiDBLite consensus disorder prediction 1 27 - -
Bpe05g00123 296 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 293 IPR007818 GO:0003700|GO:0006355
Bpe05g00123 296 MobiDBLite consensus disorder prediction 11 27 - -
Bpe05g00123 296 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 86 128 IPR006510 -
Bpe05g00123 296 Pfam Domain of unknown function (DUF702) 84 227 - -
Bpe05g00123 296 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 178 226 IPR006511 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g00228 Bpe05g00123 CCT
Bpe02g00368 Bpe05g00123 CCT
Bpe02g00368 Bpe05g00123 ECH
Bpe04g00228 Bpe05g00123 ECH
Bpe02g01715 Bpe05g00123 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00123 Bpe-Chr5:2598777 Bpe10g00138 Bpe-Chr10:2605842 1.40E-78 dispersed
Bpe02g01715 Bpe-Chr2:19629997 Bpe05g00123 Bpe-Chr5:2598777 1.59E-172 wgd
Bpe02g00368 Bpe-Chr2:2420906 Bpe05g00123 Bpe-Chr5:2598777 2.53E-122 wgd
Bpe04g00228 Bpe-Chr4:1542559 Bpe05g00123 Bpe-Chr5:2598777 2.17E-122 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21412 PF05142 DUF702 1.10E-63 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00123 - - jre:108991308 377.481