Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00138 ATGGCTTTACTGACTTTCTTGCCGGAACAATCTGACCCAGAAAAGAGAGAACAGGACGCCAAATCAAAGCGAAAGAGAAAGAAGCAGAAGCCGCCATCTTCGTGGGAACAGTTCAAGAGTCTGCTCCGTTGCAAACAGATGGAAGCGAGCAAAGTGCACGGCCCGTCGAAAAACACAGGACCCTACTCCAAGCTAGGCTCCTCCTGCAGCGCCATTTGCAGCTTCAAAGACGTGGTCCACGGCAACACTAGAGTCGTTCACAAAGCCGACAACTCGCCCAACTCTACCTCAGTGAGTAAGGAGGCCCGGTTGCTCAGTCGGAGAGGTGAAAGTCGCCCGTCCGCTCAGTCTGGCAGAGGAATGCAACTGCGACGACTCTCTGGATACCCAGTTTCTCGAAATACAATATGTGCATGCCCACAATGCGGAGAGGTCTTCCCCAAGATTGAAAGTTTAGAGCTTCACCAAATACTTCGACACGCAGTATCGGAGCTGGGGCCGGAGGATGCAGGTCTCAATATCGTGGAGATAATCTTCAAGTCGAGTTGGATGAAGAAAGATAGCCCCGTCTGCCAGATCGAACGGATATTAAAAGTCCACAACAACCAGAAGACGATCCAACGGTTCGAGGAATGTCGGGACACGGTCAAAATCCGTGCGCTGAACAGCACTAGAAAAAACCCCAGGTGTGCAGCTGATGGAAATGAACTGCTTCGGTTCCATTGTAGCACTTTATCGTGCGCCCTCGGTACACGTGGCTCGACGAGCTTGTGCGGGTCCACTCCAAGTTGTGGGGTCTGCAATATAATCAGGTATGGCTTTCAAGGTAAGGGCGAGATCAAGGGCGTCAGGACCATGGCTAGCAGCGGCAGGGCCCACGACGCTTTGCGTTGTGGGGAAGGTGGCAGGGCCATGCTCGTATGTCGTGTCATCGCCGGGAGGGTGAAGCGTATTGCGGATGATGCACCCGCGGAGGAGGACAGCATCTCCTCTGGCTCTGGATCATACGACGCCGTAGCATGGTCCCCTGGGCTCTACTCCAATGGGGAAGATCTCATTGTTTTTAATCCAAGGGCTATCCTTCCCTGCTTTGTGGTGATTTACAAAGCCATGCAGTCGTAG 1122 53.12 MALLTFLPEQSDPEKREQDAKSKRKRKKQKPPSSWEQFKSLLRCKQMEASKVHGPSKNTGPYSKLGSSCSAICSFKDVVHGNTRVVHKADNSPNSTSVSKEARLLSRRGESRPSAQSGRGMQLRRLSGYPVSRNTICACPQCGEVFPKIESLELHQILRHAVSELGPEDAGLNIVEIIFKSSWMKKDSPVCQIERILKVHNNQKTIQRFEECRDTVKIRALNSTRKNPRCAADGNELLRFHCSTLSCALGTRGSTSLCGSTPSCGVCNIIRYGFQGKGEIKGVRTMASSGRAHDALRCGEGGRAMLVCRVIAGRVKRIADDAPAEEDSISSGSGSYDAVAWSPGLYSNGEDLIVFNPRAILPCFVVIYKAMQS 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3254886 3256528 + Bpe017522.1 Bpe05g00138 103915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00138 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 137 165 IPR013087 -
Bpe05g00138 373 MobiDBLite consensus disorder prediction 87 123 - -
Bpe05g00138 373 ProSitePatterns Zinc finger C2H2 type domain signature. 137 160 IPR013087 -
Bpe05g00138 373 Gene3D - 156 372 - -
Bpe05g00138 373 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 24 372 - -
Bpe05g00138 373 MobiDBLite consensus disorder prediction 87 102 - -
Bpe05g00138 373 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 24 372 - -
Bpe05g00138 373 MobiDBLite consensus disorder prediction 1 39 - -
Bpe05g00138 373 SUPERFAMILY ADP-ribosylation 162 370 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g00246 Bpe05g00138 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00477 Bpe-Chr4:3012432 Bpe05g00138 Bpe-Chr5:3254886 6.34E-92 dispersed
Bpe05g00138 Bpe-Chr5:3254886 Bpe11g00729 Bpe-Chr11:5568109 4.99E-67 dispersed
Bpe04g00246 Bpe-Chr4:1648146 Bpe05g00138 Bpe-Chr5:3254886 3.78E-168 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21415 None None None None Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00138 - - zju:107435832 540.036