Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00152 ATGGAGGACTTCTGGAAGAACATTTGCATAGCTTCTTTCCACGATCAACGCTCCGATTACTTGTCCACTGCCACTCACTACGCCTCTCGAGCCATCATCCTCCAAGATTTCCTGGCTAAGCCATTCTCCGATGACGCAACGCCGCCCCTGTCTGCTCCTCGCTCCAGGTTATTGAGCTCTGCAGAAACTCCAGCATCTTCTTTTCTGAGTCTGAGTTCCGGGTCTGGTTTCCGACCGATAGATTCATTTAAATCGAACCCGCAATTGCGTGCAAAAAAGAGATCTCGGGAAACGGGCGACAATTCCACAGATCAGAAACACGAGCGCTTGATTAAGAGCAGAGAGTCAGCTGCTCGGTCCAGAGCTAGAAAACATGCTTATACAAGTAAGTTGGAGCTAGAGGTTGCCCGATTACAGGAAGAAAATGCTGAGCTGAGAAGATTGCAAGAAAAGATGTATGTTGCAACCACCGCGCGGCTTCCACAAAAGAAGAATCTTTACAGAACCTTAACGGCACCATTCTGA 525 48.38 MEDFWKNICIASFHDQRSDYLSTATHYASRAIILQDFLAKPFSDDATPPLSAPRSRLLSSAETPASSFLSLSSGSGFRPIDSFKSNPQLRAKKRSRETGDNSTDQKHERLIKSRESAARSRARKHAYTSKLELEVARLQEENAELRRLQEKMYVATTARLPQKKNLYRTLTAPF 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4372289 4373078 - Bpe017539.1 Bpe05g00152 103929

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00152 174 PANTHER PROTEIN FD-LIKE 1 174 - -
Bpe05g00152 174 Coils Coil 128 158 - -
Bpe05g00152 174 MobiDBLite consensus disorder prediction 73 124 - -
Bpe05g00152 174 MobiDBLite consensus disorder prediction 87 124 - -
Bpe05g00152 174 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 103 147 IPR004827 GO:0003700|GO:0006355
Bpe05g00152 174 CDD bZIP_plant_BZIP46 105 158 - -
Bpe05g00152 174 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 174 IPR043452 GO:0003700|GO:0045893
Bpe05g00152 174 SUPERFAMILY Leucine zipper domain 106 150 IPR046347 GO:0003700|GO:0006355
Bpe05g00152 174 SMART brlzneu 102 169 IPR004827 GO:0003700|GO:0006355
Bpe05g00152 174 Pfam bZIP transcription factor 104 147 IPR004827 GO:0003700|GO:0006355
Bpe05g00152 174 Gene3D - 104 155 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00152 K14432 ABF; ABA responsive element binding factor - vvi:100260902 130.954
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00152 Bpe-Chr5:4372289 Bpe13g00401 Bpe-Chr13:11743656 3.45E-14 dispersed
Bpe02g01800 Bpe-Chr2:20258779 Bpe05g00152 Bpe-Chr5:4372289 9.72E-13 wgd
Bpe05g00152 Bpe-Chr5:4372289 Bpe06g00134 Bpe-Chr6:2368310 1.03E-27 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1167 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bpe05g00152 . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005347 1 0 1 2 3 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 1 2 35
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21416 PF00170 bZIP_1 1.40E-08 CL0018 Bpe TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe05g00152 Bpe_Chr05 FPKM 2.186684 2.250754 2.282678 2.016262 4.507622 4.043312 5.222143 2.375 2.693 2.978115