Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00166 ATGGCGGACGAGACGACCGAGGCTTTGGTTTATCTTCATGGCGACCTCCATTTGAAAATCATCGAGGCTCGGAGCTTGCCTAACATGGACTTGCTCTCTGAGCGTTTTCGTCGATTTTTTTCGACGTTCAACACGTGTGTTGCTCCATTTTCGAAAAGGAGTGAACACCATCACCACCACAAAATCATCACCAGCGATCCTTACGTAACCGTCTGCCTTGCAGGAGCTACAGTTGCTCGCACTCGAGTAATTTCAAATTCGCAGAATCCTGTTTGGAATGAGAGCTTCATTATTCCTCTGGCTCACCCCGTCTCGCTGGTCGAGTTCCATGTGAAAGACAACGACGTATTTGGCGCGGAAATGATCGGTACAGCCACAGTCTCTGTGCAGAGAATTATTTCCGGTGAACCTATAAATGACTGGTTTCCAATAATAAACGCATTCGGGAAACCACCGAAGCCAGATTCAGCTGTTCGTCTGGAAATGACATTCACCAAATGCAACGATAATCCAATCTACAGATACGGAATTGCAACCGATCCGCTTCATTTTGGGGTTCGTAATTGCTATTTTCCTGTACGGCCAGGGGGTTCTGTGACGCTTTATCAGGACGCTCACATTCCGGATTCAGCTTTGGGGAAGATTGAATTGGATAGTAAGACTGAGTTTCAGCACGAGAATTGTTGGGAGGATATTTGCCATGCAATTTTGGAGGCTCATCATTTGGTCTACATTGTTGGTTGGTCGATTTATCATAAAGTGAAGCTAGTGAGAGAGCCTACGAAACCGTTGCCCAGCGGTGGGAATTTGAACTTGGGAGATTTGCTCAAGTATAAGTCCCAAGAAGGAGTGCGGGTTTTGTTGTTGGTTTGGGATGATAAGACTTCGCATAACAAATTTTTCATTAATACGGCTGGAGTAATGCAAACTCATGATGAAGAGACTCGGAAGTTTTTCAAACACTCCTCTGTTACATGTGTGCTGTCACCTCGATATGCCAGCAGTAAACTCAGCATTTTTAAGCAACAGGCACGCTTTATACCATTGACCAGTGATGGTGCACTCTATTTCCTCTCGAAAAATTATCAATGCTTTTACTTTTATAAAACCTTTTTAGTTGTTGTCGTGGGAACCCTCTTTTCACATCACCAGAAATGTGTGATTGTAGATACACAAGCATCTGGAAATAATCGGAAAATAACTGCTTTCCTCGGAGGTCTTGATCTTTGTGATGGTCGCTATGATACTCCTGAGCATAGACTATTTCGTGATCTTGATACTGTGTTTCAGAATGATTATCATAATCCAACATTACCAGGTGCACCCAATGGTCCCAGGCAGCCTTGGCACGATTTACATTGCAAAATTGAAGGCCCTGCTGCATATGATGTGCTTACAAATTTTGAGCAACGATGGAGAAAAGCCACAAAATGGTCAGAAATAGGACAGCGTTTCAAAAGGGTGTCTCACTGGCACGAGGATGCTTTAATAAAGTTGGAACGTATTTCATGGATACTAAGTCCTTCCTCATCAGTTCCAAATGATGATCCATTACTGTGGGTTTCCAGTGAAGATGATCCTGAAAATTGGCATGTTCAGGTTTTTCGTTCGATAGACTCAGGATCCTTGAAAGGATTTCCTAAAGATGTTTATCAAGCTGAAATTAAGAATCTAGTCTGTGCAAAAAATTTGGTCATTGACAAGAGCATTCAAACTGCATACATCCAAGCAATAAGATCTGCTCAACACTTCATATACATTGAAAACCAGTATTTCCTTGGATCATCATACGCATGGCCTTCTTACAAAAACGCAGGTGCCGATAATCTGATTCCCATGGAGTTGGCATTAAAGATTACCAGTAAGATTAAAGCCAATGAAAGATTCGCTGTTTATGTGGTAATACCAATGTGGCCCGAGGGTCTTCCATCTTCCGCTGCTGTGCAAGAAATTCTCTATTGGCAGGGACAGACAATGCAAATGATGTATAATATCATCGCACGACAACTTAAATCCATGAAGATAGAGAACTCACATCCACTAGAGTACCTGAATTTTTACTGTCTTGGCAATAGAGAAGAAGTGCCCCAGGAGTTGTCAGGCTCAAGTAATGTCTCTTCAAAGAGTGGAGACCCGGCCTCAGATTCAGAGAGGTTTCGAAGGTTTATGATCTATGTACATGCCAAGGGAATGGTTGTTGATGATGAGTATGTCATCTTAGGGTCTGCCAATATAAATCAGCGATCAATGGCTGGCTCAAGAGACACGGAGATAGCCATGGGCGCATATCAACCTCATCACACATGGGGTAAGAAGAAGCGACATCCACGTGGGCAGGTTGTTTATGGGTACAGAATGTCCTTATGGGCAGAACATACGGGGATGATTGATGATCACTTCAAGGAACCTGAAAGTTTGGCTTGTGTGAGGAGTGTAAACAAGATAGCTGAAGATAACTGGAGCAAGTACACTGCAAGGGAATTCATACCATTACAGGGGCACCTTCTCAAATACCCGCTCGATGTGGATGCGAATGGCAAAGTACGGCCGCTTGTCGGACAAGAATCCTTCCCCGATGTCGGTGGTAAGGTGCTCGGAACCCATACTACCCTCCCTGATGCTCTAACAACA 2631 43.67 MADETTEALVYLHGDLHLKIIEARSLPNMDLLSERFRRFFSTFNTCVAPFSKRSEHHHHHKIITSDPYVTVCLAGATVARTRVISNSQNPVWNESFIIPLAHPVSLVEFHVKDNDVFGAEMIGTATVSVQRIISGEPINDWFPIINAFGKPPKPDSAVRLEMTFTKCNDNPIYRYGIATDPLHFGVRNCYFPVRPGGSVTLYQDAHIPDSALGKIELDSKTEFQHENCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTKPLPSGGNLNLGDLLKYKSQEGVRVLLLVWDDKTSHNKFFINTAGVMQTHDEETRKFFKHSSVTCVLSPRYASSKLSIFKQQARFIPLTSDGALYFLSKNYQCFYFYKTFLVVVVGTLFSHHQKCVIVDTQASGNNRKITAFLGGLDLCDGRYDTPEHRLFRDLDTVFQNDYHNPTLPGAPNGPRQPWHDLHCKIEGPAAYDVLTNFEQRWRKATKWSEIGQRFKRVSHWHEDALIKLERISWILSPSSSVPNDDPLLWVSSEDDPENWHVQVFRSIDSGSLKGFPKDVYQAEIKNLVCAKNLVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKITSKIKANERFAVYVVIPMWPEGLPSSAAVQEILYWQGQTMQMMYNIIARQLKSMKIENSHPLEYLNFYCLGNREEVPQELSGSSNVSSKSGDPASDSERFRRFMIYVHAKGMVVDDEYVILGSANINQRSMAGSRDTEIAMGAYQPHHTWGKKKRHPRGQVVYGYRMSLWAEHTGMIDDHFKEPESLACVRSVNKIAEDNWSKYTAREFIPLQGHLLKYPLDVDANGKVRPLVGQESFPDVGGKVLGTHTTLPDALTT 877
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5121384 5125818 - Bpe025794 Bpe05g00166 103943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00166 877 Gene3D Endonuclease Chain A 212 496 - -
Bpe05g00166 877 PANTHER PHOSPHOLIPASE D 8 876 - -
Bpe05g00166 877 Gene3D Endonuclease Chain A 546 768 - -
Bpe05g00166 877 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 378 413 IPR001736 GO:0003824
Bpe05g00166 877 PIRSF PLD_plant 1 877 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bpe05g00166 877 Gene3D C2 domain 12 172 IPR035892 -
Bpe05g00166 877 Pfam Phospholipase D C terminal 797 867 IPR024632 -
Bpe05g00166 877 SUPERFAMILY Phospholipase D/nuclease 567 808 - -
Bpe05g00166 877 SUPERFAMILY Phospholipase D/nuclease 224 481 - -
Bpe05g00166 877 Pfam Phospholipase D Active site motif 723 749 IPR001736 GO:0003824
Bpe05g00166 877 Pfam Phospholipase D Active site motif 379 413 IPR001736 GO:0003824
Bpe05g00166 877 ProSiteProfiles C2 domain profile. 1 142 IPR000008 -
Bpe05g00166 877 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 167 IPR035892 -
Bpe05g00166 877 PANTHER PHOSPHOLIPASE D 8 876 IPR015679 -
Bpe05g00166 877 Pfam C2 domain 14 144 IPR000008 -
Bpe05g00166 877 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 722 749 IPR001736 GO:0003824
Bpe05g00166 877 SMART C2_3c 15 141 IPR000008 -
Bpe05g00166 877 CDD C2_plant_PLD 8 165 - -
Bpe05g00166 877 SMART pld_4 378 413 IPR001736 GO:0003824
Bpe05g00166 877 SMART pld_4 722 749 IPR001736 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00166 Bpe-Chr5:5121384 Bpe08g00570 Bpe-Chr8:3995518 0 dispersed
Bpe05g00825 Bpe-Chr5:21511450 Bpe05g00166 Bpe-Chr5:5121384 2.67E-18 transposed
Bpe05g00922 Bpe-Chr5:22196366 Bpe05g00166 Bpe-Chr5:5121384 0 transposed
Bpe07g00133 Bpe-Chr7:940188 Bpe05g00166 Bpe-Chr5:5121384 0 transposed
Bpe05g00166 Bpe-Chr5:5121384 Bpe06g00144 Bpe-Chr6:2560865 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00166 K01115 - jre:108981014 1452.19