Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00168 ATGGAAGTCGAACAGCAGGGTGAAATTAAGGACGAAATTGCTGAAATTGCCCCTTTTGATCCTACGAAGAAGAAGAAAAAAAAGAAGGTTGTCATACAGGACTCTGCTGATGACTCTGTGGACAAATTGGCTGAGAAAACAGAGAATTTAAGTGTTTCGGATGGGCTTGAAAGTGCATTTTCTGGCTTAAAAAAGAAAAAGAAAAAGCCTATTGAAACCAGTTTCATGAATGACGAGGCTGAAGATATAGAGGAAGATTTGGATGAGCATACTGTAGAAAATGAGGAAGCAGAAGGAATTGTTTTACAGGCACGCTATCCATGGGAAGGGAGTAATCGCGATTATGAATATGAGGAGCTTCTTGGCAGGGTGTTCAATATTCTCCGGGAGAATAATCCAGAACTGGCGGGTGATAGGCGAAGGACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAAGGAACAAAGAAAACAGTTTTTGTGAACTTTATGGATCTATGCAAATCGATGCATCGACAGCCGGACCATGTCATGACTTTCCTTTTGGCTGAATTGGGGACAAGTGGATCACTTGATGGGCAGCAAAGATTAGTTGTGAAAGGAAGATTTGCACCTAAAAACTTCGAAGGAATTCTGCGTCGTTATATTAATGATTATGTGATTTGCTTTGGGTGCAAAAGTCCAGACACTATACTTTCAAAAGAGAACCGGCTTTTCTTCCTTAGGTGTGAGAAGTGTGGTTCTGGACGATCCGTTGCTCCAATCAAAGCTGGTTTTGTTGCTCGTGTTGGCCGCAGAAATGCCGGAACATAA 810 42.1 MEVEQQGEIKDEIAEIAPFDPTKKKKKKKVVIQDSADDSVDKLAEKTENLSVSDGLESAFSGLKKKKKKPIETSFMNDEAEDIEEDLDEHTVENEEAEGIVLQARYPWEGSNRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKSMHRQPDHVMTFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINDYVICFGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5462415 5466462 - Bpe017555.1 Bpe05g00168 103945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00168 269 Gene3D - 112 254 - -
Bpe05g00168 269 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 218 253 IPR016190 GO:0003743|GO:0006413
Bpe05g00168 269 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 114 221 IPR016189 GO:0003743|GO:0006413
Bpe05g00168 269 MobiDBLite consensus disorder prediction 1 31 - -
Bpe05g00168 269 Pfam Domain found in IF2B/IF5 138 247 IPR002735 GO:0003743|GO:0006413
Bpe05g00168 269 SMART eIF2Bneu4 139 248 IPR002735 GO:0003743|GO:0006413
Bpe05g00168 269 Coils Coil 80 100 - -
Bpe05g00168 269 MobiDBLite consensus disorder prediction 1 22 - -
Bpe05g00168 269 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 2 269 - -
Bpe05g00168 269 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 269 IPR045196 GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01608 Bpe-Chr2:18974341 Bpe05g00168 Bpe-Chr5:5462415 1.14E-08 dispersed
Bpe05g00168 Bpe-Chr5:5462415 Bpe14g00346 Bpe-Chr14:3320457 7.49E-10 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00168 K03238 - zju:107411571 462.225