Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00171 ATGGCGGAAGCTAATCAGAAGCTGATAGTTGATCGGAGAAGTGGATTCTGCAAAGCCAATTCCGTGTATTACAGCAAACGGAAGCCTATTCCGCTACCGCCGAACAATTCCCTCGATGTCACCACTTTTATCTCTTCACGGGCCCACAATGGGAAGATCGCCTTCATCGACGCCTCCACCGGCCAGTACCTGACATTTACAGAGCTCTGGCGAAGCGTCGATTCGGTCTCGGCGAGTCTTTCCCAAATGGGTATTGGAAAGGGAGCCGTGGTTCTTCTCCTCTCCCCGAACTCCATTTTCTTCCCAGTCGTCTGCCTTGCAATCATGTCTCTCGGCGCGATTATCACCACCACTAATCCCCTTAATACCCCTCGCGAAATAGCCAAGCAAATCGCGGATTCCAAACCAGTTCTGGCTTTCACCACTCACCAACTCCTCCCAAAACTTGCCTATTCTAATCTTCCCATCGTCCTAATCGACGGGCATACCGCCCAAGCGGAAGCAAAAATTGTGTCCACTTTGGGAGAAATGATGAAGAAAGATCCGAGTGGGGTCCGAGTGAAGAGCCGAGTCAACCAGGAAGATACGGCGACCTTACTTTACTCATCTGGCACTACAGGAGCCAGTAAAGGAGTGGTTTCCTCGCACAAAAATCTTATAGCCATGGTTCAAATTGTTCTGAACCGATTTCGTCTGGAAGAAGGGGATCAGACTTTCATCTGCACCGTCCCTATGTTCCATATCTACGGTCTAGCCGTTTTTGCGACGGGTCTGCTCGCGTCCGGATCTACAATAATTGTGCTGTCGAAATTCGAAATCCATGATATGTTGTCGGCGATCGGGAAGTACAAGGCGACGTACCTCCCGTTGGTGCCTCCGATACTGGTGGCGCTAATGAGCAACGCCAATCAGATAAAGCCAAAGTATGATTTGAGCTCCTTGCAATGGGTTTTATCAGGTGGAGCTCCGCTGAGCAAGGAGGTGATAGAGGGATTCTTGGAGAAGTTTCCGACGATCACGATTCTTCAAGGGTACGGTCTAACCGAATCAGCCGGCGTCGGAGCTTCAACGGACTCGATGGAAGAGAGTCGGAGATACGGGACGGCTGGGATGTTGTCACCGAACATTGAGGCCATGATAGTGAACCCAGAATCCGGTGAGGCTTTGGCGGAGAATCAGACGGGTGAGCTTTGGCTCAGAGGTCCTACCATCATGAAAGGTTATTTCTGCAATGAAGAGGCCACTTCAACTACCATTGATTCGGCGGGGTGGTTAAGAACAGGCGATCTCTGCTATATCGATGAAGATGGATTTGTTTTTGTGGTGGATAGATTGAAAGAACTCATCAAATACAAGGGCTATCAGGTTGCTCCCGCAGAACTGGAGGCATTGTTGATTACCCATCCCCAAATTTCAGATGCTGCTGTCATTCCGTTTCCTGATAAAGAGGTGGGGCAATATCCCATGGCGTATGTGGTGAGGAAGCCTGGAAGCGGTATTTCAGAGAGGGGAGTCATGGATTTTGTAGCCAAACTGGTGGCGCCGTACAAGAGGGTTAGAAGGGTGAAGTTTGTGGAATCCATTCCCAAAAATGCTTCCGGCAAGATTCTGAGGAAGGACCTCATAAACCTAGCCACCACCTCCAAGCTTTGA 1653 49.85 MAEANQKLIVDRRSGFCKANSVYYSKRKPIPLPPNNSLDVTTFISSRAHNGKIAFIDASTGQYLTFTELWRSVDSVSASLSQMGIGKGAVVLLLSPNSIFFPVVCLAIMSLGAIITTTNPLNTPREIAKQIADSKPVLAFTTHQLLPKLAYSNLPIVLIDGHTAQAEAKIVSTLGEMMKKDPSGVRVKSRVNQEDTATLLYSSGTTGASKGVVSSHKNLIAMVQIVLNRFRLEEGDQTFICTVPMFHIYGLAVFATGLLASGSTIIVLSKFEIHDMLSAIGKYKATYLPLVPPILVALMSNANQIKPKYDLSSLQWVLSGGAPLSKEVIEGFLEKFPTITILQGYGLTESAGVGASTDSMEESRRYGTAGMLSPNIEAMIVNPESGEALAENQTGELWLRGPTIMKGYFCNEEATSTTIDSAGWLRTGDLCYIDEDGFVFVVDRLKELIKYKGYQVAPAELEALLITHPQISDAAVIPFPDKEVGQYPMAYVVRKPGSGISERGVMDFVAKLVAPYKRVRRVKFVESIPKNASGKILRKDLINLATTSKL 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5627243 5629228 + Bpe017558.1 Bpe05g00171 103948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00171 550 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Bpe05g00171 550 SUPERFAMILY Acetyl-CoA synthetase-like 45 545 - -
Bpe05g00171 550 Gene3D - 21 446 IPR042099 -
Bpe05g00171 550 PANTHER BNAA06G14440D PROTEIN 10 545 - -
Bpe05g00171 550 Pfam AMP-binding enzyme C-terminal domain 460 535 IPR025110 -
Bpe05g00171 550 Gene3D - 447 548 IPR045851 -
Bpe05g00171 550 CDD 4CL 32 541 - -
Bpe05g00171 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 545 - -
Bpe05g00171 550 Pfam AMP-binding enzyme 47 451 IPR000873 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01904 Bpe-Chr4:24029163 Bpe05g00171 Bpe-Chr5:5627243 1.95E-159 dispersed
Bpe05g00171 Bpe-Chr5:5627243 Bpe13g00207 Bpe-Chr13:10124954 2.83E-157 dispersed
Bpe05g00171 Bpe-Chr5:5627243 Bpe11g00304 Bpe-Chr11:2228801 5.33E-155 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00171 K10526 - zju:107419834 858.981