Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00178 ATGGGCTGCTCTTACTCTAAACTCGAAGATCTCCCGGCCGTCGCTTTGTGTCGTGACCGTTGCCGGTTCCTCGACGATGCGCTTCGTTATGGCCATGCTTTTTCCGACTCTCACTTGGCTTACATGGAGTCTCTGAAGGCAATAGCGCCTGCTCTTCTTCGATTTATCGAGCAGAATGGTGGAGATTGCTTCGCCTCATTAAATAATGGTGATTCTGTTATCTACAATCTCGACCCTCCCGAATCTTTCTTAGCTGGGAATTCAACTGGTCGATCTTCTTCGAGCTCAAACTCAGACTCACACATCCAGTTTCGCTCTGACTCAGAAGAGGAAGATGCAGAAAAAGAAAATGGAATGTTTCTTAAGATTCACCAAAATCGCTTCGATAACGACAGAACTGGAACATCAATTTCGAACGACTACACGTACATGAACAACTGCGCAGCTCCCAGACTATCTCCACCGCCTCCTCCCGGCAATTCGAGTTGGGATTTCATGAATTTTTTCGACACGTATGAAAAATATGAGCCTCTTTTTGCTCCCAATTGGGACCGCCATGGAGTTGAGAAATTTGAATCTAAAAACAGGGACAAAGAGAGAACCAGTAATAAGCCAGTAGGGGGCGAGAAGAAGACTCCCCAAGTTGGGGGAAAAGGTGGATTGCAGAAAGAAAAACCCGAACCGGAGAAACGAAACCATTCGTCTGCAATGAGAAATGGTAGTGACATCGGCCGAGGAGTTGCTGCTGACATGATGAAAGAAATTCAGATGGAGTTCAAAAGTGCGCGCGATTCGGCCAATGAAGTTTTGAGGTTGCTCTGCTACAGAAATGGTATAAATCCAGTTATTTCGGATTATCTGGTCTTTGATGAAGACGCAAGCATCAGTTCTCAGAGCTTATATTCTACTTTGAAGAAGCTCTGGACATGGGAGAAGAAACTTTATGCTGAAGTTAAGGCTGAGGAGAGATTGCGTTTAGTTCTTGAAAAGAAGTGTCGGCAGCTAAAACGTCTGGAAGACAGGAAGGCGGCCGATGCCAGTAAAATTGACTCCACTCGAACTCTCGTCAGAAATTTGGCAACTAAACTGAAAGTTTCGATTCAGGTTGTCGACAGGATATCCACTACTAGCAGCAAGTTAAGGGATGGAGATTTCTGTGTTTTTGTTACTGAATTAATTCATGGTTTACTTGGTATGTGGAGATCTATGCTGGAGTGTCACAAAAACCAGAACCGATGTTTTGCACAAGCCAAAAGTTTACATCTCAAATCCAGCAATCGCGAGCTCAACGATGACCATGTCGGAGCAGCACTTCAACTGAAGGCCGCATTTGAAAACTGGAACTCGAGCTTCTCCTTCTGGATCGAAACCCAAAAACACTACGTCAAAACCTTAAACGGCTGGCTTCTTAGGTGCCTCCTCCCCGAGCCTGAAGAAACTCTTGCCGGTGCCCTACCTCTCTCGCCGGGAAGAATAGGAGCCCCTTCTGTGTTCGTCACTTTCCATCGCTGGTCAGTAGCCATGGATAAACTCTCGGAGAACATAGTTATCGAATCGATGAATCGGTTCATCCGCAGTTTGGATATTCTTCTGAACCAGTTCCAGTTAGATATTCAAGAAAGGCTGAAAGAAGGAAAAGATCTGGACGGGAAAGAATCGACCTCGGAAGAGGCGAAAAAAATTCAGACAGTTAACAAAAAGACGTTTGCAGAGACTCCGCATCAAAGTAAGAGCGATTTGAGTTTAAATTTGAAACAGATTTTCCTGGCGATGGAGACTTTCATTGACGACTCCGTACGAGCATACGAGGATGTCTGTGTACGAATGGGCATGTAG 1836 45.26 MGCSYSKLEDLPAVALCRDRCRFLDDALRYGHAFSDSHLAYMESLKAIAPALLRFIEQNGGDCFASLNNGDSVIYNLDPPESFLAGNSTGRSSSSSNSDSHIQFRSDSEEEDAEKENGMFLKIHQNRFDNDRTGTSISNDYTYMNNCAAPRLSPPPPPGNSSWDFMNFFDTYEKYEPLFAPNWDRHGVEKFESKNRDKERTSNKPVGGEKKTPQVGGKGGLQKEKPEPEKRNHSSAMRNGSDIGRGVAADMMKEIQMEFKSARDSANEVLRLLCYRNGINPVISDYLVFDEDASISSQSLYSTLKKLWTWEKKLYAEVKAEERLRLVLEKKCRQLKRLEDRKAADASKIDSTRTLVRNLATKLKVSIQVVDRISTTSSKLRDGDFCVFVTELIHGLLGMWRSMLECHKNQNRCFAQAKSLHLKSSNRELNDDHVGAALQLKAAFENWNSSFSFWIETQKHYVKTLNGWLLRCLLPEPEETLAGALPLSPGRIGAPSVFVTFHRWSVAMDKLSENIVIESMNRFIRSLDILLNQFQLDIQERLKEGKDLDGKESTSEEAKKIQTVNKKTFAETPHQSKSDLSLNLKQIFLAMETFIDDSVRAYEDVCVRMGM 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6765765 6767854 + Bpe017568.1 Bpe05g00178 103955

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00178 611 Pfam Protein of unknown function (DUF632) 291 526 IPR006867 -
Bpe05g00178 611 MobiDBLite consensus disorder prediction 222 236 - -
Bpe05g00178 611 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Bpe05g00178 611 MobiDBLite consensus disorder prediction 85 115 - -
Bpe05g00178 611 Coils Coil 321 341 - -
Bpe05g00178 611 PANTHER UNCHARACTERIZED 287 609 - -
Bpe05g00178 611 MobiDBLite consensus disorder prediction 190 206 - -
Bpe05g00178 611 MobiDBLite consensus disorder prediction 85 102 - -
Bpe05g00178 611 MobiDBLite consensus disorder prediction 190 244 - -
Bpe05g00178 611 PANTHER F5M15.15 287 609 - -
Bpe05g00178 611 PANTHER F5M15.15 1 273 - -
Bpe05g00178 611 PANTHER UNCHARACTERIZED 1 273 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00178 - - - zju:107419782 422.55
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g01762 Bpe05g00178 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00178 Bpe-Chr5:6765765 Bpe07g00696 Bpe-Chr7:13582855 1.12E-15 dispersed
Bpe12g00141 Bpe-Chr12:1036883 Bpe05g00178 Bpe-Chr5:6765765 9.17E-15 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g64 . . . . . . . . Cmo05g00988 . . . . . . . . . . . . . . . Cla08g00934 Cam08g1381 Cec08g0962 Cco08g1081 Clacu08g1088 . Cre08g0871 Cone4ag2032 . . . . . . . . Blo18g00738 . Bda01g01568 Bpe02g01762 Bpe05g00178 Bma01g00695 . . . . . . Car05g00852 . Cpe11g00780 . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012946 0 1 0 0 1 1 1 1 1 1 2 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 0 28
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe05g00178 Bpe_Chr05 FPKM 4.718667 3.598227 7.325036 6.541666 17.583014 18.957954 16.338854 0.0 0.080689 0.0