Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00186 ATGGCCAACAAGCTTTCAGATGAATTAACCGAGAAAACTGGCATGTTTGGTCTCATGGTCTGGGAAGTAATCGGAATTGCTGTCGGGTTGTTCATTGTAGTCATTCTATCTGTACTCTCATTATGTCTTACGTCGAGAAAGAAGTCGAGGAGAGCTAGGGACAAAATAATGCTTTGTCAAATCCCTGCTGTTTCCAAGGAGATCAAAGAGGTTAGAGTGGAGCAATTATCAGCAGATGAATTTGTTCCACGCGATGGAATTCTTCTCACCATTCATGACAAATCAAATGAAAAAGGTTCAGACAAGGTTTTGGTCCACGTTGATGTGGGGAAGATGAAGAACGGAGACAGTAGCAGTCAGTCAGGTTCGTTTCATCTGTTCGATAAAGATGGAGCTGGATCTCAATCAGGAGAAGAAGGAAGTTCTGGCAAGGTCACCATATACAGACCCTCTTCTTCTTCCTATCCGATTACTGCTCCTTCTCCGCTTTCTGGCCTGCCTGAATTTTCTCACTTGGGTTGGGGTCACTGGTTTACTCTGAGAGATCTTGAGGTTGCTACAAACCGATTCTCCAAAGAAAATGTCCTCGGGGAGGGCGGTTATGGAGTTGTTTATCAGGGGCGTCTAATCAATGGAACTGCAGTGGCGGTGAAAAGGATTCTCAATAATCTGGGTCAGGCGGAGAAAGAATTTCGAGTGGAAGTAGAAGCCATTGGTCATGTGCGCCATAAGAATTTGGTTCGACTTCTGGGTTATTGCATTGAAGGAACTCACAGGATGCTGGTTTATGAGTATGTCAACAATGGAAACTTAGAGCAATGGCTTCACGGAGCTATGCATCATCATGGGTACCTTACTTGGGAGGCACGGATGAAAATTCTACTTGGTACCGCAAAAGCGCTTGCATATTTGCATGAGGCTATTGAGCCTAAAGTGGTGCATCGTGACATTAAATCGAGCAACATATTGATTGACGACGATTTCAATTCGAAGGTATCTGACTTCGGCCTGGCCAAGTTGCTGCGTGCTGGAAAAAGTCATGTTACAACTCGAGTGATGGGAACCTTCGGATACGTAGCTCCTGAATATGCAAATACTGGTCTTTTGAATGAGAAGAGCGATGTCTATAGCTTTGGGGTTTTGCTTCTTGAAATAATTACCGGAAGAGATCCTGTAGATTACGGACGCCCTTCCCAGGAGGTAAATCTAGTAGATTGGTTGAAAATGATGGTTGGAAGCAGGCGATCGGAAGAAGTTGTTGATCCAAACATGGAGGTAAGGCCATCCACAAGAGCTCTAAAACGAGCACTTTTGACCGCTTTAAGGTGCGTCGACCCTGATTCTGAAAAGAGACCAAAGATGGGTCAAATTGTGCGCATGCTCGAGTCAGAAGAGTATCCACTAACTCGAGAGGATCGAAGGCAGAGAAGAACTCAGGCAAGCAGCACTGACATTGAATCGCAGAGGGAGTATTCCGATACAGACCTGAGCGAAAATCCGGCGTCGCGATCGGAAAGCAGGCGGGACCAGCATATGTAA 1539 45.48 MANKLSDELTEKTGMFGLMVWEVIGIAVGLFIVVILSVLSLCLTSRKKSRRARDKIMLCQIPAVSKEIKEVRVEQLSADEFVPRDGILLTIHDKSNEKGSDKVLVHVDVGKMKNGDSSSQSGSFHLFDKDGAGSQSGEEGSSGKVTIYRPSSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLEVATNRFSKENVLGEGGYGVVYQGRLINGTAVAVKRILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMHHHGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNSKVSDFGLAKLLRAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEIITGRDPVDYGRPSQEVNLVDWLKMMVGSRRSEEVVDPNMEVRPSTRALKRALLTALRCVDPDSEKRPKMGQIVRMLESEEYPLTREDRRQRRTQASSTDIESQREYSDTDLSENPASRSESRRDQHM 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7996475 7999256 - Bpe017581.1 Bpe05g00186 103963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00186 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672|GO:0006468
Bpe05g00186 512 ProSitePatterns Protein kinases ATP-binding region signature. 196 218 IPR017441 GO:0005524
Bpe05g00186 512 MobiDBLite consensus disorder prediction 462 480 - -
Bpe05g00186 512 CDD STKc_IRAK 196 462 - -
Bpe05g00186 512 MobiDBLite consensus disorder prediction 114 145 - -
Bpe05g00186 512 PANTHER OS01G0323000 PROTEIN 2 510 - -
Bpe05g00186 512 Pfam Protein kinase domain 191 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00186 512 SUPERFAMILY Protein kinase-like (PK-like) 174 473 IPR011009 -
Bpe05g00186 512 Gene3D Transferase(Phosphotransferase) domain 1 266 480 - -
Bpe05g00186 512 SMART serkin_6 190 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00186 512 ProSiteProfiles Protein kinase domain profile. 190 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00186 512 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 2 510 - -
Bpe05g00186 512 Gene3D Phosphorylase Kinase; domain 1 172 265 - -
Bpe05g00186 512 MobiDBLite consensus disorder prediction 462 512 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01849 Bpe-Chr2:20623860 Bpe05g00186 Bpe-Chr5:7996475 0 dispersed
Bpe05g00186 Bpe-Chr5:7996475 Bpe15g00137 Bpe-Chr15:11484806 0 dispersed
Bpe05g00186 Bpe-Chr5:7996475 Bpe10g00918 Bpe-Chr10:14803184 5.17E-94 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63345 PF00069 Pkinase 1.60E-48 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00186 - - mnt:21405451 870.922