Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00209 ATGGCTTACGGGGATGATTCCAAAAAGAGGAAGAGATATGCAATGGTGGGTGTTTCAGGTTTGTTGCTTGTCGCCATGGTTGTGGCCGTGACGGTCGGAGTTAACTCGAACGGCAGCAGTGATAACTCTACGACGAGCAGCGACACCACTGAATTGTCTGCTTCAATGAAATCCATTCAGTCCATTTGCCAACCCACGACCTATAAACAAGAATGTGTTGAGAGTCTCAAATCATCAAACTCGAGTGATCCGAAGGAACTCATTCAGGTTGGCTTCAAAGCTGCCATGAAATACGTCAATGAGGCTGCGAAGAAATCGGTTACCTTGCAAGAGATCGAAAAAGACCCGAGGGCTGCCAAAGCTCTTGCCGGTTGTAAAGAACTCATGGACTTCGCCATTGGCGAGCTCAAGCATTCGTTCAACAAGTTGGGTGAATTCGACATCACAAAGATTGATGAAATGCTCATAGACTTGAGAATTTGGCTAAGTGCTACCATCACGTACCAAGAAACTTGCTTGGATGGGTTTGAAAACACAACAAGCAGCTCCGGGGAGAAGATGAAATCAGCTTTGAAGACTTCCATGAGGCTAACCAGCAATGGTCTAGCCATGGTCACAGAGATGTCCTCCCTTCTAACGGACTTACAAATTCCGGGAATCAACCGTAGGCTGCTATCCGATGACCTTCCCGTCCTCGGCCATGACGAGTTCCCTGTCTGGTTCAACCCCGGCCTCAGGAGACTCCTCCAAGCTCCGGCTTCAAGCATCAAGGCCGACATCGTCATTGCCAAGGATGGAAGTGGAACATATAAGACCATAAATGAAGCACTAACTGACATCCCTAAGTACAGCAATACTACCTTTGTGATTTACATCAAGGAAGGTGTTTATGATGAAACTGTCCATTTCAACAAAACCATGACCCATTTGCTCGTCATCGGTGACGGCCCGACCAAAACCCGCATCACCGGAAACAAAAACTTCGTCGACGGCACCCCCACCTTTAAGACTGCAACAGTCGCTGTTCTTGGGGATTACTTCACTGCAAAGGACATTGGATTTGAAAATACCGCAGGAGCTGAGAAACACCAGGCGGTCGCGTTGAGAGTCCAATCGGACTTCTCAGTCTTCTACAACTGCGCAATGGATGGTTACCAAGACACTCTATATGCTCACGCAAAGCGACAGTTCTATCGCGATTGCGAGGTCTCTGGTACTATTGACTTCGTTTTCGGCGATGCTGCTGCCGTCTTCCAAAACTGCACGTTCTTAGTCAGGAAGCCATTGGAGAACCAGCAAACAATCGTGACCGCCCAGGGAAGAAAGGATAGAAGACAACCATCAGCATTGATCCTCCAGAAGTGCAAGATCACCTCCGCGCCTGAGTATTTTCCTGTCAGAAAGCAATTCAGAGCATTCCTTGGTCGGCCATGGAAGGAGTACTCAAGGACAATAATCATGGAATCATTCATTGATGATTTGATTCAGCCAGAAGGTTGGCTCCCATGGATGGGAGATTTCGGTCTCAGAACCTGCTTCTACACCGAATTCAACAACAACGGCCCTGGTTCGAATAAATCGCAGAGAGTGAAGTGGCGGGGAATCAAGACGATCAATGCAGCACATGCAGTAAAATTCACTGCCGGGAGCTTCTTCAAAGGCGATAGCTGGATCAAGGCGAGTGGAGTGCCTTACAATGCCGGTATGTTTACCTCTGCTTAA 1722 48.03 MAYGDDSKKRKRYAMVGVSGLLLVAMVVAVTVGVNSNGSSDNSTTSSDTTELSASMKSIQSICQPTTYKQECVESLKSSNSSDPKELIQVGFKAAMKYVNEAAKKSVTLQEIEKDPRAAKALAGCKELMDFAIGELKHSFNKLGEFDITKIDEMLIDLRIWLSATITYQETCLDGFENTTSSSGEKMKSALKTSMRLTSNGLAMVTEMSSLLTDLQIPGINRRLLSDDLPVLGHDEFPVWFNPGLRRLLQAPASSIKADIVIAKDGSGTYKTINEALTDIPKYSNTTFVIYIKEGVYDETVHFNKTMTHLLVIGDGPTKTRITGNKNFVDGTPTFKTATVAVLGDYFTAKDIGFENTAGAEKHQAVALRVQSDFSVFYNCAMDGYQDTLYAHAKRQFYRDCEVSGTIDFVFGDAAAVFQNCTFLVRKPLENQQTIVTAQGRKDRRQPSALILQKCKITSAPEYFPVRKQFRAFLGRPWKEYSRTIIMESFIDDLIQPEGWLPWMGDFGLRTCFYTEFNNNGPGSNKSQRVKWRGIKTINAAHAVKFTAGSFFKGDSWIKASGVPYNAGMFTSA 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 13344035 13345841 + Bpe017620.1 Bpe05g00209 103986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00209 573 PANTHER PECTINESTERASE 15 569 - -
Bpe05g00209 573 CDD PMEI-like_3 61 210 - -
Bpe05g00209 573 TIGRFAM PME_inhib: pectinesterase inhibitor domain 47 207 IPR006501 GO:0004857
Bpe05g00209 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 209 IPR035513 -
Bpe05g00209 573 Pfam Plant invertase/pectin methylesterase inhibitor 58 204 IPR006501 GO:0004857
Bpe05g00209 573 SMART PMEI_2 54 204 IPR006501 GO:0004857
Bpe05g00209 573 Gene3D - 253 569 IPR012334 -
Bpe05g00209 573 PANTHER PECTINESTERASE 15 569 - -
Bpe05g00209 573 Pfam Pectinesterase 259 555 IPR000070 GO:0030599|GO:0042545
Bpe05g00209 573 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
Bpe05g00209 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 209 IPR035513 -
Bpe05g00209 573 SUPERFAMILY Pectin lyase-like 256 567 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00209 Bpe-Chr5:13344035 Bpe05g00827 Bpe-Chr5:21532637 0 dispersed
Bpe05g00209 Bpe-Chr5:13344035 Bpe13g01126 Bpe-Chr13:16828866 5.82E-177 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00209 K01051 - csv:101207393 776.548