Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00238 ATGGCCTTCTCTCTCTCCTCCCTCAAGACCTCTGCAATTTCACTCTCCCTTCTCTCCTTCTTCCTCTTCTTCCTCCTCAAAACCCCACCTTTATTCACCGATGATCATCCCTCAATTTCACCTCTTTTCCCCAAAAGGTCCCTCATCTCCTCCGCCGACTCTTCCTCTTCATCCCCATCCTGTTCTTCCGTCAAATCCCTCTCCGATGGCGGCCTCCTCAACTACTTCTCCCTCCATTTTTGCCTCTTTGAAGAAGACCCATTTCTCTCTATCCCCTTTCTGTCTCTTCTTCTCTTTCTACACTTCTATATTCTCATCACAACCGCACAGGATTATTTCTCTATCGTTACTACCAAGCTTGCTTTTCATCTCAACCTATCTCCGAGTATGGGTGCTGTGACTCTCCTAGCACTAGGAAACGGCGCTCCTGATGTATTTGCTTCGGTTGCGGCAGTCCGCGGTGGTCAGTACAGAACTGGCTTTGGTGCAATTCTGTCGGCAGGCACATTTGTATCTGCTTTTGTGGTTGGATTCGTGGCGATTTACGCTGCGCCCTTTGCAGTGAACCCAGCTCCATTTGTGAGGGACGTATTGTTTTATTTATTTGCAGCCTTGTTCTTGTTCTATGTGTATCTCAGCGCAGAGATCTTTCTATGGCAAGCGATTGGATTTGTTGGATTCTACCTATTTTTTGTTTCCTTTGTATTTTGGATGGATTTCGGGATGGGTGCTGAAGAATCAAGGAAGGGAATCGAAATTGTGGGGCAGCCAGTTATTGTGGCACCAGAATGTGAGATCGGTTCTGGTTTGAGAAATCCAGATGAAGCAAAACCAAGTTCTGGAATTTGTCAAGTTTTCACAATGATCTCTAAAGCATGGAGCGTGCCAGTTGGGTTCGTGTTAAAACTCACAATTCCCCAACCATCGCCGTCCGAATGGAGCAGATTCTACACATCAGCCAATATCGCTTTCTGCCCACTCGCACTGTTATACTCCTGCAACTTATTTGTACCGTTCAGTTATCCTATCGTTTTCCTCTTCTCTCACACCCATCTCCCTCTCTGGCTTGTGGTTCTGTGTGGAAGCTCTTCTCTTTCGTTTCTTCACTTTGCCATGGAAAAAGAACCACCAAAAACAGAGCAAGTTTCCATAATTCTTGTGGCATTTGTTATGAGCGTGTTTTGGATATCCACCATTGCAGGTGAGCTACTCAATTGCCTAGCCGCCCTCGGCACTCTCCTCAAATTACCTCAATCTCTTCTGGGGTTGACTGTTCTTGCATGGGGAAATTCGGTGGGAGACCTCGCTGCTGATGTGGCCCTTGCGAAAGCTGGCCAGCCGTTACTGGCCATGGCTGGGTGCTTTGCTGGGCCAATGTTTAACATGCTCGTTGGGCTCGGAACAGCTTTGGTTATGCTAACGGCTAATACGTATCCAGAGGCATATCATCTTGAATTTCATTTGGGAATAGTTATTGCCTTTGTGTTCTTGCTTCTGAGTCTGATGGGTTCTCTCCTGGTAGTTATCTGGTCCAGGTTCCGAGTTCCAAGATTGTGGGGATTTTGTCTGGTTGGACTTTACGTTGTTTTCATGGCTGTCTGCTTGCTCATCGCGAAGCTTTCTGGGTAA 1629 46.9 MAFSLSSLKTSAISLSLLSFFLFFLLKTPPLFTDDHPSISPLFPKRSLISSADSSSSSPSCSSVKSLSDGGLLNYFSLHFCLFEEDPFLSIPFLSLLLFLHFYILITTAQDYFSIVTTKLAFHLNLSPSMGAVTLLALGNGAPDVFASVAAVRGGQYRTGFGAILSAGTFVSAFVVGFVAIYAAPFAVNPAPFVRDVLFYLFAALFLFYVYLSAEIFLWQAIGFVGFYLFFVSFVFWMDFGMGAEESRKGIEIVGQPVIVAPECEIGSGLRNPDEAKPSSGICQVFTMISKAWSVPVGFVLKLTIPQPSPSEWSRFYTSANIAFCPLALLYSCNLFVPFSYPIVFLFSHTHLPLWLVVLCGSSSLSFLHFAMEKEPPKTEQVSIILVAFVMSVFWISTIAGELLNCLAALGTLLKLPQSLLGLTVLAWGNSVGDLAADVALAKAGQPLLAMAGCFAGPMFNMLVGLGTALVMLTANTYPEAYHLEFHLGIVIAFVFLLLSLMGSLLVVIWSRFRVPRLWGFCLVGLYVVFMAVCLLIAKLSG 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 14772140 14774730 - Bpe017652.1 Bpe05g00238 104015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00238 542 Gene3D - 319 536 IPR044880 -
Bpe05g00238 542 Gene3D - 126 256 IPR044880 -
Bpe05g00238 542 Pfam Sodium/calcium exchanger protein 386 535 IPR004837 GO:0016021|GO:0055085
Bpe05g00238 542 Pfam Sodium/calcium exchanger protein 95 236 IPR004837 GO:0016021|GO:0055085
Bpe05g00238 542 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 284 540 - -
Bpe05g00238 542 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 11 248 - -
Bpe05g00238 542 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 11 248 - -
Bpe05g00238 542 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 284 540 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02173 Bpe-Chr2:23000447 Bpe05g00238 Bpe-Chr5:14772140 1.30E-17 dispersed
Bpe05g00238 Bpe-Chr5:14772140 Bpe08g00551 Bpe-Chr8:3840626 2.22E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00238 K13754 - csv:101209909 695.656