Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00261 ATGACTCCAGTATTGAGCAATGTACTATCAAGAGTGCATACACTATCCACTTCTGATCATTCCTCCGTGGTGTCCATGAATTTATTTGTTGCGCTGCTTTGTGGCTGTATTGTGATTGGTCATCTTCTTGAAGAGAATCGGTGGATGAATGAATCAATTACGGCCCTTGTGATTGGTCTAAGTACTGGAGTTGTTATTTTGCTATTCAGTGGGGGGAAAAGTTCGCATTTGTTAGTCTTCAGTGAAGATCTTTTCTTTATTTATCTTCTTCCACCTATTATATTCAATGCCGGGTTTCAGGTGAAAAAGAAGCAGTTTTTCAAAAACTTTATTACAATTATGCTATTTGGTGCCGTTGGTACATTAATCTCTTGTTGTGTCATATCATTAGGTGTTATACAGTTCTTTAAGAAGTTGGATATCGGATCGCTGGAAATTGGAGATTATTTAGCAATCGGTGCAATATTTGCTGCAACAGATTCTGTGTGCACATTGCAGATATTGAATCAGGATGAGACGCCTTTACTCTACAGTCTCGTATTTGGAGAGGGTGTAGTAAATGATGCCACATCAGTGGTGCTATTTAACGCAATCCAGAGCTTTGACCTAACCCATATTGATTCCAGGATTGCGTTACAATTTATTGGCAGCTTCTTCTACTTATTTTTTACAAGCACTGTTCTTGGAGTGATTACTGGTTTGCTCAGTGCTTTCATCATCAAAAAGCTGTATTTTGGCAGGCATTCTACAGACCGCGAGGTTGCTTTAATGATACTAATGGCATACCTTTCTTACATGATGGCAGAATTGTTCTATTTGAGTGGCATTCTTACAGTGTTCTTTTGTGGAATTGTGATGTCACATTACACCTGGCATAATGTCACGGAAAGTTCACGAATTACAACAAAGCATGCTTTTGCTACCTTGTCTTTTGTTGCTGAGATCTTTATCTTCCTTTACGTTGGCATGGACGCATTGGACATTGAAAAATGGAGATTTGTCAGTGACAGTCCTGGGACATCTGTGGCTGTCAGTTCAATACTGTTAAGTCTGGTTTTGGTTGGAAGAGCTGCTTTTGTTTTTCCTTTATCCTTTCTGGCCAACTTAGCAAAAAAATCACCAGTGGAGAAAATTAGCTTTAGGCAGCAAGTGATAATATGGTGGGCTGGCCTCATGAGAGGTGCTGTATCAATGGCTCTTGCTTATAATCAGTTTGCAAGATCCGGTCACACTCAATTGCGTGGGAACGCAATCATGATCACAAGCACCATTACAGTCGTTCTCTTCAGCACAGTGTTATTTGGGTTGATGACCAAGCCTCTCATAAGGTTCTTGTTGCCTCAACCGAAATGGGCGGTGAGTATGGTTTTGTCCGATCCATCTACTCCCAAATCGTTCATCGTTCCGCTTCTTGGAGGCAGTCAAGATTCTGAAGTAGATATTGGAGGCCACGATATTATCCGGCCAAGCAGTATTCGGGATCTCTTGACCACCCCAACACATACTGTTCATCGCTACTGGCGTAAATTTGATGATGCCTTCATGCGCCCAGTGTTTGGCGGACGGGGATTTGTTCCCTTCGTGCCCGGATCGCCAACCGAGAGGAATCCCAACCAATGGCAGTGA 1626 42.0 MTPVLSNVLSRVHTLSTSDHSSVVSMNLFVALLCGCIVIGHLLEENRWMNESITALVIGLSTGVVILLFSGGKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFKNFITIMLFGAVGTLISCCVISLGVIQFFKKLDIGSLEIGDYLAIGAIFAATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLTHIDSRIALQFIGSFFYLFFTSTVLGVITGLLSAFIIKKLYFGRHSTDREVALMILMAYLSYMMAELFYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVSDSPGTSVAVSSILLSLVLVGRAAFVFPLSFLANLAKKSPVEKISFRQQVIIWWAGLMRGAVSMALAYNQFARSGHTQLRGNAIMITSTITVVLFSTVLFGLMTKPLIRFLLPQPKWAVSMVLSDPSTPKSFIVPLLGGSQDSEVDIGGHDIIRPSSIRDLLTTPTHTVHRYWRKFDDAFMRPVFGGRGFVPFVPGSPTERNPNQWQ 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15529673 15535485 - Bpe017674.1 Bpe05g00261 104038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00261 541 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 26 445 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe05g00261 541 PANTHER SODIUM/HYDROGEN EXCHANGER 8 540 IPR018422 GO:0006812|GO:0015299|GO:0016021
Bpe05g00261 541 Gene3D - 145 197 - -
Bpe05g00261 541 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe05g00261 541 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe05g00261 541 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe05g00261 541 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe05g00261 541 Pfam Sodium/hydrogen exchanger family 28 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bpe05g00261 541 PANTHER SODIUM/HYDROGEN EXCHANGER 2 8 540 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01873 Bpe05g00261 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01873 Bpe-Chr2:20764189 Bpe05g00261 Bpe-Chr5:15529673 0 dispersed
Bpe05g00261 Bpe-Chr5:15529673 Bpe06g00499 Bpe-Chr6:16214655 0 dispersed
Bpe05g00855 Bpe-Chr5:21739042 Bpe05g00261 Bpe-Chr5:15529673 0 transposed
Bpe02g01889 Bpe-Chr2:20861052 Bpe05g00261 Bpe-Chr5:15529673 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00261 - - zju:107412105 905.205