Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00263 ATGGGGTGTATACATAGCCGAGAAATATCTTCTCAGAATGTCGTAAGCTCAGAGGTTAAGAGGGAAATAAGTTCTGCTAATCTATCAAATAGGAAGGTAGATGATGATTTAGAGCAGGTGGTGCCAAAAGCAGGTTCTAATGCTGTCGACGAACTTAATGGCTTGGCTGAGAAAGAGATAAAAGCAGGCGAGGATCGGTATGTGTCACGGGAAAGAAGAAAGTCTAGGCCAAAACAAAGGTCGAATGTTAATCTGAAGCAGTCACCAGGGGAGCAGCTGGCTGCAGGATGGCCACCTTGGCTTACAGCAGTGTGCAGAGAGGCACTCAATGGTTTGGTCCCAAGGAGGGCAGATTCATTCGAAAAAATTGAAAAGATTGGACAGGGAACTTATAGTAATGTATATAAAGCTAAAGATACAATCACAGGTAAAATTGTTGCACTAAAGAAGGTTAGATTTGACAATGCGGAGCCAGAGAGTGTGAAATTTATGGCGAGAGAGATACAAATTCTGCGGCAGTTAGATCACCCTAATGTTATAAAGTTGGAGGGAATAGTTACATCAAGAATGGGGTATAGTTTGTATCTGGTGTTTGAGTATATGGATCATGATTTAGCTGGCCTTGCTGCAAACCCAGACATTAAATTTACAGAACCCCAGGTCAAGTGTTTTATGCATCAGCTATTATCTGGACTGGAGCACTGTCATAATCATGGTGTGCTTCATCGTGACATCAAAGGGTCTAATCTTCTTATTGATAGTGGAGGAGTACTAAAGATTGCTGATTTTGGCTTGGCTTCTTTCTTTGATCCTAACCACAAACATCCCATGACTAGTCGTGTGGTTACATTATGGTACCGACCACCTGAGCTTCTACTTGGGGCTACTGATTATGGTGTGGGAATAGACCTATGGAGTGCTGGTTGTATTGTAGCTGAGTTATTAGCCAGGAGGCCCATTCTGCCTGGCCGTAATGAGGTAGAGCAACTACACAAGATATACAAGCTTTGTGGCTCCCCTTCTAATGATTACTGGAAAAGAGCAAAATTGCCAAATGCAGCCTTATTTAAGCCCCCACAACCTTACAAAAGATGTATAAGAGAGACATTTAAAGATTTTCCGCCCTCGTCTTTCTCTCTGATTGAGACTCTTCTCGCAATTGATCCAGCAGAAAGAAAAACAGCAACAATTGCATTAGAAAGTGAGTTCTTCATCACGAAACCCTATGCTTGTGAGCCTTCTAGTTTACCAAAATTCCCTCCTAGTAAGGAGATTGATGCAAAACGACGGGATGATGAAGCTCGGAGATTAAGAGCAGCCAGTAAGGCTCAGGGTGATGGCGTGAAGCAAAAACGAACTCGTGGCCGTGCTCCAAGGGCTGCGCCGGCTCCTGAAGCTAATGCTGAATTCCAACCAAATATAGATAGAAGGCGTCTAATAACACGGGCAAACGCCATTAGCAAGAGCGAGAAATTTCCTCCTCCACATCAAGACGGAGAAATTGGCTTTCCGTTTGGATATTTGCAGCACAACAATCCTGCCAATGCTACAAAAGGCATCCCATTTAGCCCAACCTCATTTGGCAATTTGAAAGACTCCGATCAAGCCTGGTCCGGTCCATTGGTTAACACTTCCGGAGTTGGTGCTTGTAGACCGAATAAGCATGTCGGTGGCAATGCTTGGAAATACTCTAAAGGGAAGAGTTTGGTTTAG 1713 43.72 MGCIHSREISSQNVVSSEVKREISSANLSNRKVDDDLEQVVPKAGSNAVDELNGLAEKEIKAGEDRYVSRERRKSRPKQRSNVNLKQSPGEQLAAGWPPWLTAVCREALNGLVPRRADSFEKIEKIGQGTYSNVYKAKDTITGKIVALKKVRFDNAEPESVKFMAREIQILRQLDHPNVIKLEGIVTSRMGYSLYLVFEYMDHDLAGLAANPDIKFTEPQVKCFMHQLLSGLEHCHNHGVLHRDIKGSNLLIDSGGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGIDLWSAGCIVAELLARRPILPGRNEVEQLHKIYKLCGSPSNDYWKRAKLPNAALFKPPQPYKRCIRETFKDFPPSSFSLIETLLAIDPAERKTATIALESEFFITKPYACEPSSLPKFPPSKEIDAKRRDDEARRLRAASKAQGDGVKQKRTRGRAPRAAPAPEANAEFQPNIDRRRLITRANAISKSEKFPPPHQDGEIGFPFGYLQHNNPANATKGIPFSPTSFGNLKDSDQAWSGPLVNTSGVGACRPNKHVGGNAWKYSKGKSLV 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15541292 15546517 - Bpe017676.1 Bpe05g00263 104040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00263 570 CDD STKc_CDK9_like 120 404 - -
Bpe05g00263 570 PANTHER OS01G0367700 PROTEIN 65 556 - -
Bpe05g00263 570 MobiDBLite consensus disorder prediction 66 91 - -
Bpe05g00263 570 Gene3D Transferase(Phosphotransferase) domain 1 203 443 - -
Bpe05g00263 570 ProSiteProfiles Protein kinase domain profile. 120 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00263 570 Pfam Protein kinase domain 120 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00263 570 SUPERFAMILY Protein kinase-like (PK-like) 115 409 IPR011009 -
Bpe05g00263 570 MobiDBLite consensus disorder prediction 422 453 - -
Bpe05g00263 570 PANTHER CELL DIVISION PROTEIN KINASE 65 556 - -
Bpe05g00263 570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Bpe05g00263 570 MobiDBLite consensus disorder prediction 415 469 - -
Bpe05g00263 570 Gene3D Phosphorylase Kinase; domain 1 109 202 - -
Bpe05g00263 570 SMART serkin_6 120 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00263 570 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01919 Bpe-Chr4:24144143 Bpe05g00263 Bpe-Chr5:15541292 4.23E-70 dispersed
Bpe05g00263 Bpe-Chr5:15541292 Bpe14g01150 Bpe-Chr14:8570446 0 dispersed
Bpe05g00263 Bpe-Chr5:15541292 Bpe13g00648 Bpe-Chr13:13319298 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63347 PF00069 Pkinase 1.30E-68 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00263 K08819 - mnt:21393537 787.334