Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00271 ATGAATGATACCACACATACCGAACCTGATTATTCTGAGTTTGTGGAAGTCGATCCAACTGGAAGATATGGCAGATACGATGAAATCCTAGGAAAAGGATCTTCCAAGACGGTTTATAGAGCATTTGATGAGTACAATGGAATTGAAGTTGCTTGGAACCAGATCAAACTCTATGATTTTCTGCAATGCCGAGAAGATCTTGAAAGACTGTACAGTGAAATTCATCTTCTAAAAACATTGAAACACAAAAATATTATGAAACTCTACGCTTCCTGGGTCGATACTTCAAATAGGAACATCAATTTTGTCACTGAAATGTTCACTTCTGGAACACTAAGACAATACAGGCTGAAGCACAGGAGAGTTAGCATTAGAGCAGTGAAGCATTGGTGTAGACAGATCTTGAAAGGGCTTGTCTATCTTCATAGCCATGACCCACCTGTGATTCACAGAGATCTCAAGTGTGATAATATTTTTGTAAATGGAAATCAAGGAGAAGTAAAGATTGGTGATCTCGGCCTCGCTGCAATTCGCCGGAAATCGCACGAAGATCATTGTGTTGGGACTCCAGAATTTATGGCTCCGGAAGTTTATGAAGAGGCATACAATGAATTAGTTGACGTCTATTCATTTGGAATGTGCTTATTGGAGATGGTTACATTTGAGTATCCATATAGTGAATGTACTCATCCTGCTCAAATTTACAAGAAAGTTACTTCTGGGAAAAAACCGGATGCCTTCTACAGAGTGAATGATCCTGAAGTAAAGCAATTTGTCGAGAAATGTTTGGCAACTGTGTCGCTTAGACTATCTGCTAGGGAGCTCTTGAATGACAGTTTTCTGGGAATCCAGGACTGTGAATATGATTTGAGACCGTTGGATCGTGGTTCGAGGGATGAGGGTCATCTGATAAGACAGCCTTTCTTTGATCTAAATGTTGGTAAAAGCACTCTTTGTAGCGGAGGATCTGATGATTATAATTATTTTGATGCTTCAAGTAAATGGGGGTTTCCTCTTGTTGAGGTTGAACCTAGCGGAATCGAGCTTTTTGAGCGTCGAGATGATGAACATTACGATGCCGTTGACATAAGTATTATCGGCAAGATGAGGAGAGAAAATGGCAAAATCTTTCTAAGACTCAGAATTTCGTATAAAGATGGCCTGATTCGGAACATTTATTTCCCGTTTGATACCAAGATCGATACAGCATTAAGCGTAGCGACTGAAATGGTAGCAGAACTTGATATAATGGACCAATATGTGATGAGAATAGCAGATATGATTGATGGGGAAATTGCTTCCATAGTTCCCCAGTGGCAGCCTGGGCAAGGCATTGAGGATCCGATGGATCAAACTTTTGATCATAATTGTGCTTCAAATCGTACATCCTACAGTTCTGTAATGGAGTTTTTGAGGATGAACGATTCTGGCAAGGACTTGCAGGTTCTTCAATGTTTTAAAAGTGGCTGTTCTTCCACACTCGGAGTAGCTTCCGAGCAACTGATGGCAATGAGGATCATTTGA 1524 40.35 MNDTTHTEPDYSEFVEVDPTGRYGRYDEILGKGSSKTVYRAFDEYNGIEVAWNQIKLYDFLQCREDLERLYSEIHLLKTLKHKNIMKLYASWVDTSNRNINFVTEMFTSGTLRQYRLKHRRVSIRAVKHWCRQILKGLVYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAIRRKSHEDHCVGTPEFMAPEVYEEAYNELVDVYSFGMCLLEMVTFEYPYSECTHPAQIYKKVTSGKKPDAFYRVNDPEVKQFVEKCLATVSLRLSARELLNDSFLGIQDCEYDLRPLDRGSRDEGHLIRQPFFDLNVGKSTLCSGGSDDYNYFDASSKWGFPLVEVEPSGIELFERRDDEHYDAVDISIIGKMRRENGKIFLRLRISYKDGLIRNIYFPFDTKIDTALSVATEMVAELDIMDQYVMRIADMIDGEIASIVPQWQPGQGIEDPMDQTFDHNCASNRTSYSSVMEFLRMNDSGKDLQVLQCFKSGCSSTLGVASEQLMAMRII 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15721995 15724445 - Bpe017684.1 Bpe05g00271 104048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00271 507 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00271 507 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 496 - -
Bpe05g00271 507 Gene3D Transferase(Phosphotransferase) domain 1 107 285 - -
Bpe05g00271 507 CDD STKc_WNK 22 281 - -
Bpe05g00271 507 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00271 507 SUPERFAMILY Protein kinase-like (PK-like) 18 281 IPR011009 -
Bpe05g00271 507 Gene3D Phosphorylase Kinase; domain 1 9 105 - -
Bpe05g00271 507 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00271 507 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 496 - -
Bpe05g00271 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01273 Bpe05g00271 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01273 Bpe-Chr2:16147043 Bpe05g00271 Bpe-Chr5:15721995 0 dispersed
Bpe04g00833 Bpe-Chr4:5464926 Bpe05g00271 Bpe-Chr5:15721995 0 dispersed
Bpe05g00271 Bpe-Chr5:15721995 Bpe15g00655 Bpe-Chr15:17291114 2.40E-164 dispersed
Bpe05g00271 Bpe-Chr5:15721995 Bpe06g00276 Bpe-Chr6:13710977 3.75E-149 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63349 PF00069 Pkinase 1.90E-50 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00271 K08867 - jre:108979484 756.518