Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00296 ATGTTATCAGTTTTGATGAACTTTTTAAGGGCCTGCTTTTTTCCCGCATCGGATCGGCGTGTCAAGGGATCGGATTCCAGAGGGCGGCAGGACGGCCTCCTCTGGTACAAAGACAGTGGGCAACACTTGAATGGTGATTTTTCAATGGCTGTTGTTCAGGCCAATAACATACTTGAGGACCAGAGTCAGATTGAATCTGGCTGTTTGAGTTCTAACGAATTTGGCCTTTTTGGCACTTTTGTTGGTGTTTACGACGGGCATGGCGGCCCCGAGACTTCCCGCTATATCACTGATCACCTTTTTCGACATCTCAAGAGATTTGCTTCAGAGCAAAAAACAATGTCTGTCGATGTAATAAGGAAGGCATTCCAAGCTACGGAAGATGGGTTCACTTCCTTAGTCTCAAAACAGTGGCAGATGAAGCCGCAAATTGCAGCCGTTGGATCGTGTTGCCTAGTAGGAATCGTGTGTAGTGGGACTCTCTACGTTGCCAACTTAGGCGATTCACGAGCTGTTTTAGGAAGACTAGTGAAAGCCACAGGGGACGTTCTAGCAATACAGGTATCGGCTGAGCATAATGCCGCCATTGAGTCTGTCAGACAGGAGCTTCGTGCTGCACATCCCCATGACCCGCACATTGTTCTTCTGAAGCATAATGTATGGCGAGTTAAGGGTCTTATACAGATCTCTCGATCTATTGGCGATGTGTATCTGAAGAAAGCTGAGTTCAACAGGGAGCCTCTTTATGCTAAGTATCGCCTCCGTGAACCTTTCAAGACGCCGATTTTGAGCTCAGAACCATCAATTTCAGTGCTCCAATTGCAGCCTTGTGATCAATTTATCATATTTGCATCGGACGGTCTGTGGGAACAGCTCAGCAATCAGGAGGCTGTGGACATAGTTAAAAATCATTCACGCAGTGGAATTGCGAGGAGGTTAGTGAAAGTTGCATTACAAGAAGCAGCAAAGAAGAGAGAAATGAGATATTCCGACTTGAAGAAGATCGACAGAGGTGTAAGAAGACATTTCCACGATGACATCACAGTGATAGTCTTGTTCCTCGATTCAAGTCTAGTGAGCAGGGCTAGCTCGGTGAAGTCTCCAAATTTATCAGTGAGAGGAGGCGGGATCAACCTTCCTTTTAAAACACTCTCTCCTTACACTACACCTTTAGAAACCGGCACTGCC 1188 46.38 MLSVLMNFLRACFFPASDRRVKGSDSRGRQDGLLWYKDSGQHLNGDFSMAVVQANNILEDQSQIESGCLSSNEFGLFGTFVGVYDGHGGPETSRYITDHLFRHLKRFASEQKTMSVDVIRKAFQATEDGFTSLVSKQWQMKPQIAAVGSCCLVGIVCSGTLYVANLGDSRAVLGRLVKATGDVLAIQVSAEHNAAIESVRQELRAAHPHDPHIVLLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKYRLREPFKTPILSSEPSISVLQLQPCDQFIIFASDGLWEQLSNQEAVDIVKNHSRSGIARRLVKVALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVLFLDSSLVSRASSVKSPNLSVRGGGINLPFKTLSPYTTPLETGTA 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 16261037 16262684 + Bpe025805 Bpe05g00296 104073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00296 396 Pfam Protein phosphatase 2C 79 323 IPR001932 -
Bpe05g00296 396 CDD PP2Cc 47 354 IPR001932 -
Bpe05g00296 396 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 386 - -
Bpe05g00296 396 SMART PP2C_4 38 352 IPR001932 -
Bpe05g00296 396 ProSitePatterns PPM-type phosphatase domain signature. 80 88 IPR000222 GO:0043169
Bpe05g00296 396 SUPERFAMILY PP2C-like 55 355 IPR036457 -
Bpe05g00296 396 PANTHER ALPHABET, ISOFORM E-RELATED 5 386 - -
Bpe05g00296 396 Gene3D - 35 364 IPR036457 -
Bpe05g00296 396 ProSiteProfiles PPM-type phosphatase domain profile. 46 354 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe05g00296 Bpe07g00712 CCT
Bpe05g00296 Bpe12g00129 CCT
Bpe05g00296 Bpe15g00803 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00296 Bpe-Chr5:16261037 Bpe15g00803 Bpe-Chr15:18230296 0 dispersed
Bpe13g00398 Bpe-Chr13:11713551 Bpe05g00296 Bpe-Chr5:16261037 2.01E-09 transposed
Bpe12g00129 Bpe-Chr12:923008 Bpe05g00296 Bpe-Chr5:16261037 0 wgd
Bpe05g00296 Bpe-Chr5:16261037 Bpe07g00712 Bpe-Chr7:13703790 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00296 - K01102 tcc:18607514 656.751