Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe05g00312 | ATGTCTTCCACCTTCAGCGGCGATGAAACTGCTCCCTTTTTCGGCTTTCTAGGCGCCGCTGCTGCCCTTGTTTTCTCCTGTATGGGAGCTGCGTATGGTACAGCAAAAAGTGGTGTTGGTGTGGCTTCAATGGGAGTTATGAGACCCGAGCTGGTGATGAAATCTATTGTTCCAGTAGTTATGGCTGGAGTTTTGGGTATCTATGGCTTGATTATTGCTGTCATTATTAGCACAGGGATCAATCCCAAGGCCAAATCATATTACCTATTTGATGGTTATGCTCATTTGTCATCTGGTCTTGCTTGTGGCCTTGCTGGGCTGTCTGCCGGAATGGCAATTGGTATTGTTGGTGATGCTGGTGTCAGGGCCAATGCACAGCAGCCAAAACTTTTTGTGGGGATGATTTTGATTCTCATTTTCGCAGAGGCTCTGGCTCTCTATGGGCTCATTGTTGGGATCATCTTATCTTCCCGAGCTGGCCAATCCAGAGCAGAGTAG | 498 | 47.79 | MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE | 165 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 16688258 | 16695079 | - | Bpe017726.1 | Bpe05g00312 | 104089 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe05g00312 | 165 | PANTHER | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT | 3 | 165 | - | - | |
Bpe05g00312 | 165 | SUPERFAMILY | F1F0 ATP synthase subunit C | 13 | 77 | IPR035921 | - | |
Bpe05g00312 | 165 | PANTHER | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT | 3 | 165 | - | - | |
Bpe05g00312 | 165 | SUPERFAMILY | F1F0 ATP synthase subunit C | 87 | 156 | IPR035921 | - | |
Bpe05g00312 | 165 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 30 | 54 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Bpe05g00312 | 165 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 56 | 80 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Bpe05g00312 | 165 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 107 | 133 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Bpe05g00312 | 165 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 134 | 157 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Bpe05g00312 | 165 | TIGRFAM | V_ATP_synt_C: V-type ATPase, C subunit | 13 | 121 | IPR011555 | GO:0033179|GO:0046961|GO:1902600 | |
Bpe05g00312 | 165 | CDD | ATP-synt_Vo_c_ATP6C_rpt2 | 89 | 156 | - | - | |
Bpe05g00312 | 165 | CDD | ATP-synt_Vo_c_ATP6C_rpt1 | 13 | 80 | - | - | |
Bpe05g00312 | 165 | Gene3D | - | 11 | 162 | IPR035921 | - | |
Bpe05g00312 | 165 | Pfam | ATP synthase subunit C | 97 | 155 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Bpe05g00312 | 165 | Pfam | ATP synthase subunit C | 17 | 76 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01721 | Bpe-Chr2:19682385 | Bpe05g00312 | Bpe-Chr5:16688258 | 2.94E-112 | dispersed | |
Bpe04g00047 | Bpe-Chr4:432678 | Bpe05g00312 | Bpe-Chr5:16688258 | 3.68E-23 | dispersed | |
Bpe02g00364 | Bpe-Chr2:2386718 | Bpe05g00312 | Bpe-Chr5:16688258 | 2.07E-08 | wgd | |
Bpe05g00130 | Bpe-Chr5:2941980 | Bpe05g00312 | Bpe-Chr5:16688258 | 4.75E-113 | wgd | |
Bpe05g00312 | Bpe-Chr5:16688258 | Bpe07g00494 | Bpe-Chr7:9605676 | 3.31E-112 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe05g00312 | K02155 | - | cit:102607521 | 288.5 |