Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00323 ATGAAGATCCGGTGCGACTTCTGCGGCAAAGACGAAGCCTCTGTGTATTGCTCCGCCGACGAAGCCGCCCTCTGCCACGGCTGTGATCGCCATGTCCACCACGCTAACAAGCTCGCCGGACAGCACAGCCGTTTCTCTCTCCTCCATCCTACCTTCAAGGAATCACCTCTCTGCGACATCTGCCAGGATAGACGAGCTTTCCTTTTCTGTCAAGAAGATAGGGCGATCCTTTGTCGAGAATGCGATGTTCCGATTCACTTAGCCAACGAACAAACCGAGAAACACAACAGATTTCTTCTCACCGGCGTCAAGCTTTCTTCAACTTCTTCTCTATACCCAACTTGTTCTTCGTCTCCTGGATATGACACATCCATTGATTCTGAAACGTGCAGAAAGAGATCAAAGACTGTTAATAATGGAGTTTCTTCATGTCCATCAGAAATCTTTCCGGCTGGAGGCAGTCAAATCAGTGATGCAGGATCCTTTTCAACTAGTCGCATATCAGAATACTTGGAGACGTTGCCTGGATGGTGTATAGAAGATTTTCTTGATCCAGCATCGTCGATCAATGGCTACTGTCAAATTTGA 588 47.62 MKIRCDFCGKDEASVYCSADEAALCHGCDRHVHHANKLAGQHSRFSLLHPTFKESPLCDICQDRRAFLFCQEDRAILCRECDVPIHLANEQTEKHNRFLLTGVKLSSTSSLYPTCSSSPGYDTSIDSETCRKRSKTVNNGVSSCPSEIFPAGGSQISDAGSFSTSRISEYLETLPGWCIEDFLDPASSINGYCQI 195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 16885232 16885917 - Bpe017737.1 Bpe05g00323 104100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00323 195 Gene3D Classic Zinc Finger 1 100 - -
Bpe05g00323 195 PANTHER B-BOX ZINC FINGER PROTEIN 20 1 194 - -
Bpe05g00323 195 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 194 - -
Bpe05g00323 195 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Bpe05g00323 195 CDD Bbox1_BBX-like 57 100 - -
Bpe05g00323 195 Pfam B-box zinc finger 3 43 IPR000315 GO:0008270
Bpe05g00323 195 Pfam B-box zinc finger 54 95 IPR000315 GO:0008270
Bpe05g00323 195 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bpe05g00323 195 SMART bboxneu5 53 100 IPR000315 GO:0008270
Bpe05g00323 195 CDD Bbox1_BBX-like 5 47 - -
Bpe05g00323 195 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe05g00323 Bpe15g00849 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01717 Bpe-Chr2:19653960 Bpe05g00323 Bpe-Chr5:16885232 1.02E-58 dispersed
Bpe05g00323 Bpe-Chr5:16885232 Bpe09g00270 Bpe-Chr9:2009553 2.11E-35 dispersed
Bpe07g00449 Bpe-Chr7:6308688 Bpe05g00323 Bpe-Chr5:16885232 1.02E-101 transposed
Bpe15g00849 Bpe-Chr15:18497243 Bpe05g00323 Bpe-Chr5:16885232 7.61E-85 wgd
Bpe02g00365 Bpe-Chr2:2405816 Bpe05g00323 Bpe-Chr5:16885232 1.37E-60 wgd
Bpe05g00126 Bpe-Chr5:2779190 Bpe05g00323 Bpe-Chr5:16885232 4.50E-67 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21424 PF00643 zf-B_box 6.60E-07 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00323 - - zju:107426654 259.225