Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00337 ATGAACACTGCGCTGCCGGAAATGTTGCACTGTTTCACTGCCAATGGGAGCTCTACGGACATGACGGTCCTGGAGAGACAGAGAGGTCGCCACAAATGTGAAGAAGAACGGCCACTAGAGCCGGAAAAGAGTCTGAGCTCCTATAATTGTTTTAATGAGTTTAGGAGTCTGTTTTCTTCTCCGATACCGGCGACCCAGGTCCAAAGCTTTCAGGGTTTGATGGGCAGAGTTGATTCAGCGCTGGGAGAGGTAGTAGTAGGCTCGTTAAAGCCCGACCCTTGCATGGATATGGTCTGGCCGGAGTTGGAGATGCCCAGTATGGAGTTCGGGTCGTCTGGCATGGTGAAAGGGAGTGCTGAGCTTGAAGAGCGTTACTCTGTTTCTAGAGCTTCCAGCTGCAAACCTGCAATGGTGGCTCTGGCAGCCGGAGAGGTCAAACGTAAAGAATTAACGGAGAAGATGAACTCTGTCGCTGGAAGAGATGGCTTCAAGAAGAGGAAAGCTGAAAAGATACAAAATGCCATGAAATTTTCTCTAAAAATAAACAATTCTTGTGAAAGAGCTTCTGATATTTTACAGGTTTCTTCTGGAGAAGACATCAGAGAGAAGAAGATCAAATCCAGCGCAGAAGAAGCAGAATCAAAGATCACAGACCAAAACACCATTAAAACCAACAACAACACAGAAACCTCAGCCGACACTTCCAAAGAAAACAATTCAAAAGCTTCGGAGGTTCAAAAGCCAGACTACATCCATGTTCGAGCACGCCGAGGCCAAGCGACAGACAGCCACAGCCTCGCAGAAAGAGTGAGACGAGAGAAGATCAGCGAGAGAATGAGATATTTGCAGGATTTAGTCCCAGGATGCAACAAAATCACAGGAAAAGCTGGAATGTTAGACGAAATCATCAACTACGTTCAATCTCTTCAACGCCAACTTCTATCGATGAAATTAGCGGCCTTGAACCCCAGGCTTGACTTCAATGTTGATGAACTCTTTGCGAAAGAGGTATTTCAGTCTTGGCAATCGAACTTTCCAAATGTAGGAGGAATTTCAACAGCAGCAAACAATTCAGCTTACACACAGTTCAATCCAATACCACAAATGCTTCCCTGTTCTGCATTGGAAATGCCCATAACTCCCTCCGAAGTCGGCCTTCATCGAACGATTAGCGCACCAGTGTCGATCATCCCAGAAAGATTCATAGACTCTTCATGCTTCGCAGGAAAACAGCCTCCTTCAACATGGAATGCGGATTTACAAAACTTTTACAACATTGGATTTGATCAAGGAAGATCAACAACTTTTCCACCTAACCCATATACAGGTAGATAA 1335 45.39 MNTALPEMLHCFTANGSSTDMTVLERQRGRHKCEEERPLEPEKSLSSYNCFNEFRSLFSSPIPATQVQSFQGLMGRVDSALGEVVVGSLKPDPCMDMVWPELEMPSMEFGSSGMVKGSAELEERYSVSRASSCKPAMVALAAGEVKRKELTEKMNSVAGRDGFKKRKAEKIQNAMKFSLKINNSCERASDILQVSSGEDIREKKIKSSAEEAESKITDQNTIKTNNNTETSADTSKENNSKASEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMRYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQLLSMKLAALNPRLDFNVDELFAKEVFQSWQSNFPNVGGISTAANNSAYTQFNPIPQMLPCSALEMPITPSEVGLHRTISAPVSIIPERFIDSSCFAGKQPPSTWNADLQNFYNIGFDQGRSTTFPPNPYTGR 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 17247750 17249381 - Bpe017753.1 Bpe05g00337 104114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00337 444 Gene3D - 256 329 IPR036638 GO:0046983
Bpe05g00337 444 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 259 309 IPR011598 GO:0046983
Bpe05g00337 444 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 22 431 IPR024097 GO:0006355
Bpe05g00337 444 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 257 317 IPR036638 GO:0046983
Bpe05g00337 444 SMART finulus 265 315 IPR011598 GO:0046983
Bpe05g00337 444 CDD bHLH_AtBPE_like 249 332 - -
Bpe05g00337 444 Pfam Helix-loop-helix DNA-binding domain 263 310 IPR011598 GO:0046983
Bpe05g00337 444 MobiDBLite consensus disorder prediction 203 248 - -
Bpe05g00337 444 MobiDBLite consensus disorder prediction 218 239 - -
Bpe05g00337 444 MobiDBLite consensus disorder prediction 203 217 - -
Bpe05g00337 444 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 22 431 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00337 Bpe-Chr5:17247750 Bpe13g00756 Bpe-Chr13:14089584 2.83E-47 dispersed
Bpe07g00427 Bpe-Chr7:4811294 Bpe05g00337 Bpe-Chr5:17247750 0 transposed
Bpe15g00864 Bpe-Chr15:18608878 Bpe05g00337 Bpe-Chr5:17247750 9.09E-137 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21426 PF00010 HLH 7.00E-06 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00337 - - jre:109013802 429.869