Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00345 ATGGCTTCTTCGCCAGAATCACCACCATCTCCGCCTTCAGATTCTTCTCCTTCCCCGCCGCAGCCTCCACCTGAAATACCGCCACCTCCGGTGGAAGCGTCACCGCCTCCACCAGATCTTTCTCCCCCTCCGGAGGAGACAACCCCTCCCTCACTATCTCCACCTCCACCTGAATCTGAGTCTCCTCCACCTCCGAACGAATCATCGACACCACCAGCATCACCATCGCCACCACCTCCTAAAAGCTCAACTAATACACCGCCGTCCCCTCCACCGCCATCCCCACACGGGACATCCACGACATCACCCCCTCCACCACCACCTCCTCCTCCGCCAACATCATCGTCGAAGAATGCATCGCCACCCCCTCCACACAAATCTCTCTCGGGGTCATCAACATCCAGCTCTTCTTCAAGTGATAGTTCATCGTCCCAAAAGTTGCCTATCATAATTGGAGTGGCTGCAGGGGCAGGTTTATTGCTTCTCATCGTGGCTTTGTTCTTCCTCTCATACTGCAGAAAGAAGAAGAAACGTAGAGATCAAATGTATTACAGAGATCAATCTCGGGGCAAAAAGGGAGGTGAATACTACAATGGTTATGGACAAAATCAGATTCCCAATCTTAAACCTCCACCTGGTGCTGTATTCGGAGAATGGACGCCACCCGCACCACCGCCTCCGCCGCCCCATCTAAGCAGTGACTTGAGCTCCAATTTCTCAGGCTCAGGCTCACAAGGACCGGCCTTGCCTCCTCCGCACCCAACTGTGGCACTTGGCTTCAACAAGAGCACCTTCACTTACGATGAGCTAGTGTCTGCAACAGGAGGATTCTCAGTGGCTAACCTCTTGGGTCAAGGTGGCTTTGGCTATGTCCACAAAGGTGTCCTTCCAAATGGAAAGGAAATTGCAGTGAAGAGTCTTAAGTTGGGAAGTGGTCAAGGCGAGCGGGAATTCCAGGCTGAGGTCGAGATTATTAGCCGCGTTCATCATCGACACCTTGTCTCCCTCGTCGGGTATTGCATTGCCGGTGGAAGAAAGATGTTGGTCTATGAATTTGTTCCCAATAATAACCTTGAATTCCACCTTCACGGGAAGGATCGCCCTCCAATGGATTGGGCTACTAGAGTCAAGATTGCTTTAGGGTCTGCTAAAGGCCTTGCCTACCTGCATGAAGACTGTCACCCGCGCATCATTCATCGAGACATAAAATCTGCAAATATTCTTATCGATTACAGTTTTGAAGCCAAGGTGGCTGATTTCGGATTGGCGAAACTAAATCAAGACAACAGCACTCACGTATCGACTCGTGTCATGGGGACTTTTGGATACTTGGCTCCTGAATATGCATCAAGCGGAAAGCTAACTGAGAAATCTGATGTTTTCTCATACGGTGTTATGCTCTTAGAACTGATAACCGGAAGGCGCCCGGTGGACCTTACTGGTGTCATGGAGGACAGCTTAGTCGACTGGGCAAGGCCTATTTGTGCTCAGGCGATGACTGATGGAGACTTCCATGAGTTGGCCGATCCGCGATTAGAACAAAACTTTATGCATCACGAAATGGCACGAATGGTCGCCTGCGCTGGTGCTTGCGTCCGACATTCTGCAAGGAGGCGCGCAAAAATGAGCCAGATTGTGAGGGCACTGGAAGGAGATGTTTCGCTCGAAGATCTAAACGAGGGGGTGAAACCAGGCCAGAGTTCATACTTCAGCTCAAGCACATCAGATTATGATGGAGGCTCGTACTGCGCAGACATGAAGAAGTTCAAGAAGGTGGCATTGAACAGCAATGAATACACGAGCAGCGAGTATGGAATGACGAGCGAATACGGGCTCAACCCGTCGTCTTCGAGCAGCGACTCCCAAGAAATAAGCATCAAAGGAAGCCGCCCAAACAGTCCTTGA 1905 51.02 MASSPESPPSPPSDSSPSPPQPPPEIPPPPVEASPPPPDLSPPPEETTPPSLSPPPPESESPPPPNESSTPPASPSPPPPKSSTNTPPSPPPPSPHGTSTTSPPPPPPPPPPTSSSKNASPPPPHKSLSGSSTSSSSSSDSSSSQKLPIIIGVAAGAGLLLLIVALFFLSYCRKKKKRRDQMYYRDQSRGKKGGEYYNGYGQNQIPNLKPPPGAVFGEWTPPAPPPPPPHLSSDLSSNFSGSGSQGPALPPPHPTVALGFNKSTFTYDELVSATGGFSVANLLGQGGFGYVHKGVLPNGKEIAVKSLKLGSGQGEREFQAEVEIISRVHHRHLVSLVGYCIAGGRKMLVYEFVPNNNLEFHLHGKDRPPMDWATRVKIALGSAKGLAYLHEDCHPRIIHRDIKSANILIDYSFEAKVADFGLAKLNQDNSTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGVMLLELITGRRPVDLTGVMEDSLVDWARPICAQAMTDGDFHELADPRLEQNFMHHEMARMVACAGACVRHSARRRAKMSQIVRALEGDVSLEDLNEGVKPGQSSYFSSSTSDYDGGSYCADMKKFKKVALNSNEYTSSEYGMTSEYGLNPSSSSSDSQEISIKGSRPNSP 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 17406581 17409193 - Bpe017760.2 Bpe05g00345 104122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00345 634 ProSiteProfiles Protein kinase domain profile. 277 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00345 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 397 409 IPR008271 GO:0004672|GO:0006468
Bpe05g00345 634 SUPERFAMILY Protein kinase-like (PK-like) 256 549 IPR011009 -
Bpe05g00345 634 MobiDBLite consensus disorder prediction 215 232 - -
Bpe05g00345 634 Pfam Protein tyrosine and serine/threonine kinase 280 549 IPR001245 GO:0004672|GO:0006468
Bpe05g00345 634 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 8 609 - -
Bpe05g00345 634 MobiDBLite consensus disorder prediction 604 634 - -
Bpe05g00345 634 ProSitePatterns Protein kinases ATP-binding region signature. 283 305 IPR017441 GO:0005524
Bpe05g00345 634 MobiDBLite consensus disorder prediction 120 144 - -
Bpe05g00345 634 SMART serkin_6 277 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00345 634 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK5 8 609 - -
Bpe05g00345 634 MobiDBLite consensus disorder prediction 1 144 - -
Bpe05g00345 634 MobiDBLite consensus disorder prediction 1 119 - -
Bpe05g00345 634 MobiDBLite consensus disorder prediction 178 253 - -
Bpe05g00345 634 Gene3D Phosphorylase Kinase; domain 1 254 352 - -
Bpe05g00345 634 Gene3D Transferase(Phosphotransferase) domain 1 353 561 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g00201 Bpe05g00345 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00533 Bpe-Chr1:3452199 Bpe05g00345 Bpe-Chr5:17406581 2.17E-172 dispersed
Bpe04g00201 Bpe-Chr4:1363947 Bpe05g00345 Bpe-Chr5:17406581 1.33E-71 dispersed
Bpe05g00345 Bpe-Chr5:17406581 Bpe10g00111 Bpe-Chr10:1939705 0 dispersed
Bpe05g00345 Bpe-Chr5:17406581 Bpe13g01312 Bpe-Chr13:18259946 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63351 PF07714 PK_Tyr_Ser-Thr 1.60E-46 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00345 - - jre:109003295 658.677