Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe05g00402 | ATGGAGGTCGATCTCTCACTCAACACAGATCATAAAGACGCAGCACAATCAGAGAAAGCAGAAGACGGCGAAGTTCATAGGGCAGTCTTCGAGGTAGAAGGTCAAAACCCGAAACAGCAACCCCCTGCCGACGCTGAAGAGGAGGCCGAAGGGGCAGTCGGAGAAGTAGATGATGATGATGCATCCATGGTTGAAGTGTCCTTGCATGATAACATGAAGGCAGAAGAGTTAGCCGCGTTACAAATGGAGATGGAGAGTATGAAGGAGGAAAATAATTGGTTGAAGAAGGTAATGGAGAAGACTATGAAAGACTATTATGATCTTCAAATGAAATTCTCAGTAATTCAGCAAAAAAGCCAAGAAAAGGATCTAAAACGAGTATTGTTTCTCCATGATGATCGGACCAAATTTGATGAGCCGAACACGATACTCAAAGCATCCATCGTTGACGGCCGGAAACCATTCTCTCCGTCAACCCAAGAGACCGACTTAGGCTTGACATTGAGCTTAAATTATGAAAGTTCAGGGAGAAAAGATGAAGATAAAGAACAGAAGAGAGAAGAAGTGATAAGTTCTATATCAATGGAGCAAAACAAACTTCAGATGAGGACTGAATTGCCTGGAATTTCGTCTCACGTTGCCTCCCATCCAAATAGAAAAGCTAGGGTTTCTGTTAGAGCTAGATGTGAAACAGCCACAATGAGCGATGGTTGTCAATGGAGAAAATACGGCCAGAAAATTGCAAAAGGAAACCCTTGCCCTCGAGCCTACTATCGCTGCACGGTGGCTCCGGGATGCCCCGTTAGGAAACAGGTGCAAAGATGCTTAGAAGACATGTCAATTTTAATAACAACGTATGAAGGGAATCATAATCATCCACTTCCGGTTGGTGCAACAGCCATGGCCTCAACAGCTTCCGCAGCTGCTTCATTTACCTTGTTGGACTCGAGCAATCTAATTCCAGAATCTTCTACCTTCAAATCATCTTCTCAACCTGCAAAACCCATCAACAACATCATTTCCAACGATCCATCTAAAGGCATTCTTCTTGATCTCACGAGAAACTTGTATGATTCCTCACATTTCCCACTTTCTAGTTCGTCGAATCCAATCTGGTTTCCAGGTTTAAGTTGGCAAGGCAAACCAAATTATCTTAATGGAAATTTCATGGGAACCAATCCTTTTCCTGGCTGTAAGAACGTGGGTGAACAGAACTTGAAAGGAGAAGGAAAACAATCATTGGACAACAACCTCAGGACTGCTATTGAGTCGGACCCGAAATTCCAAGCGGCTGTTGCGGCTGCAATAACTTCACTTATGAACAAAGAGAACAATTCAGCTCATCCGCTGATCGGAACTGGTTTTGGACTAAAGGATCAAGTGAGCGACGCCATGAACGACGGCAATTAG | 1410 | 43.83 | MEVDLSLNTDHKDAAQSEKAEDGEVHRAVFEVEGQNPKQQPPADAEEEAEGAVGEVDDDDASMVEVSLHDNMKAEELAALQMEMESMKEENNWLKKVMEKTMKDYYDLQMKFSVIQQKSQEKDLKRVLFLHDDRTKFDEPNTILKASIVDGRKPFSPSTQETDLGLTLSLNYESSGRKDEDKEQKREEVISSISMEQNKLQMRTELPGISSHVASHPNRKARVSVRARCETATMSDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGNHNHPLPVGATAMASTASAAASFTLLDSSNLIPESSTFKSSSQPAKPINNIISNDPSKGILLDLTRNLYDSSHFPLSSSSNPIWFPGLSWQGKPNYLNGNFMGTNPFPGCKNVGEQNLKGEGKQSLDNNLRTAIESDPKFQAAVAAAITSLMNKENNSAHPLIGTGFGLKDQVSDAMNDGN | 469 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 18422954 | 18425096 | + | Bpe017820.1 | Bpe05g00402 | 104179 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe05g00402 | 469 | ProSiteProfiles | WRKY domain profile. | 229 | 295 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe05g00402 | 469 | PANTHER | WRKY TRANSCRIPTION FACTOR 9-RELATED | 2 | 447 | - | - | |
Bpe05g00402 | 469 | Coils | Coil | 77 | 97 | - | - | |
Bpe05g00402 | 469 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
Bpe05g00402 | 469 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Bpe05g00402 | 469 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 2 | 447 | IPR044810 | GO:0003700 | |
Bpe05g00402 | 469 | SUPERFAMILY | WRKY DNA-binding domain | 227 | 295 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe05g00402 | 469 | Gene3D | WRKY domain | 219 | 296 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe05g00402 | 469 | Pfam | WRKY DNA -binding domain | 236 | 293 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe05g00402 | 469 | SMART | WRKY_cls | 234 | 294 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe05g00402 | Bpe-Chr5:18422954 | Bpe12g00555 | Bpe-Chr12:11403395 | 1.12E-59 | dispersed | |
Bpe05g00402 | Bpe-Chr5:18422954 | Bpe07g00352 | Bpe-Chr7:2794043 | 2.13E-166 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21430 | PF03106 | WRKY | 1.90E-24 | CL0274 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe05g00402 | - | - | gmx:100820209 | 404.445 |