Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00414 ATGGCTGCAACATCTGGGTCTGTTCTTAATGGATTAAGATCCCCTTTCTTGTCCGGAGGGAAGAGAAGCCAAGCATTGCTTGCCGGACCAGCCAGAATCGGCGTCAGTTCCGCCGTCCCTCGCAGGCAGCTTGTGGTGGTCGCCGCCAAGAAATCTTGGCTGCCTGGTGTACGAGCTGGTGGAAACTTGGTTGATCCAGAATGGCTCGATGGCTCGCTAGCTGGAGACTACGGTTTTGATCCGCTTGGACTAGGAAAAGACCCCGCATTTCTAAAATGGTACAGAGAAGCAGAGATAATCCACGGCCGCTGGGCAATGACAGCCGTTGTCGGAATCTTCGTCGGCCAAGCCTGGAGTGGCATCCCCTGGTTTGAGGCAGGAGCAGCCCCAGGCGCTGTGGCGCCATTCTCCTTCGGCACCCTGCTCGGAACGCAGCTCCTGCTAATGGGTTGGGTAGAGAGTAAAAGATGGGTGGACTTCTTCAACCCGGAGTCACAGTCGGTGGAGTGGGCGACGCCGTGGTCGCGAACCGCCGAAAATTTCGCCAACGCCACCGGGGAGCAAGGGTACCCCGGCGGGAAGTTTTTCGACCCACTGGGGTTGGCAGGAACGCTTAAAGACGGGGTTTACATTCCGGATGTGGAGAAACTGGAGAGACTGAAGTTGGCAGAAATCAAACACGCGAGAATCGCCATGGTAGCCATGCTTATCTTCTACTTTGAAGCTGGACAGGGAAAAACTCCCCTAAGCGCACTTGGATTGTAA 765 55.69 MAATSGSVLNGLRSPFLSGGKRSQALLAGPARIGVSSAVPRRQLVVVAAKKSWLPGVRAGGNLVDPEWLDGSLAGDYGFDPLGLGKDPAFLKWYREAEIIHGRWAMTAVVGIFVGQAWSGIPWFEAGAAPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGLAGTLKDGVYIPDVEKLERLKLAEIKHARIAMVAMLIFYFEAGQGKTPLSALGL 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 18522313 18523540 - Bpe017832.1 Bpe05g00414 104191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00414 254 Pfam Chlorophyll A-B binding protein 66 242 IPR022796 -
Bpe05g00414 254 SUPERFAMILY Chlorophyll a-b binding protein 63 254 - -
Bpe05g00414 254 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 254 IPR001344 GO:0009765|GO:0016020
Bpe05g00414 254 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 254 - -
Bpe05g00414 254 Gene3D Chlorophyll a/b binding protein domain 66 253 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00414 Bpe-Chr5:18522313 Bpe03g01097 Bpe-Chr3:30131429 2.87E-34 dispersed
Bpe05g00414 Bpe-Chr5:18522313 Bpe07g00339 Bpe-Chr7:2663016 5.54E-161 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00414 K08917 - vvi:100241887 453.366