Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00418 ATGGATAACTTATGTTGCTTCAGTTCTATCCATTCTCAGGTTGTGGGAGGAAAGTCGTCATGCAGCTCCGGAAAGGGTCGGAGCAATCTGATCCCTGTCAAGTATGGCTTCAGCCTAGCTAAAGGGAAAACAAATCATCCAATGGAGGATTATCATGTTGCTAAGTTCGTACCATTATGCGGACACGAGCTCGGCCTTTTCGCTATATACGACGGACATCTTGGAGATACCGTTCCGGCTTATTTACAAAAGCATCTGTTTCATAATATCTTGAAGGATGAGGCTTTTTGGACTGATCCTCGTAGGTCCATTTCGGAAGCCTATGAGAGGACAGACCAAGCAATTCTTTCTCACTCTCCCGACCTCGGAAGAGGTGGATCCACTGCAGTCACTGCTATTCTGATAAATGGCCGAAAATTATGGGTGGCAAATGTTGGAGATTCACGAGCAGTTCTTTCTAGGAGAGGGCAAGCGGAGCAGATGTCGACTGATCACGAGCCTAATATTGATCGATGTAGCATCGAGGATAGAGGTGGCTTCGTCTCAAATTTGCCAGGTTGGCGATACATTCTATGTTGGCATGTAAAACAAACTAACCTGAAAACTTTAGCTTTTAACATTAAATTAATCTTCTGTCTTGTGTTAAATATTTTAGGAGATGTTGCAAGAGTGAATGGACAGTTGGCGGTTTCTCGAGCCTTTGGTGACAAGAACCTTAAATTGCACATACGATCTGATCCTGATGTAAAAGACGCTGATATTAACGCAGAGACAGATATTCTCATTTTAGCTAGTGATGGTATATGGAAGGTGATGTCGAATCAAGAAGCAGTGGATATCGGGAGGAAGACGAAGGATCCGGAGAAGGCAGCCAAGCAACTAGTGTCGGAGGCGTTGAGCCGTGAAAGCAAAGACGACATCTCCGTCGTCGTAGTTCGTTTCGCAAGCTAA 951 44.58 MDNLCCFSSIHSQVVGGKSSCSSGKGRSNLIPVKYGFSLAKGKTNHPMEDYHVAKFVPLCGHELGLFAIYDGHLGDTVPAYLQKHLFHNILKDEAFWTDPRRSISEAYERTDQAILSHSPDLGRGGSTAVTAILINGRKLWVANVGDSRAVLSRRGQAEQMSTDHEPNIDRCSIEDRGGFVSNLPGWRYILCWHVKQTNLKTLAFNIKLIFCLVLNILGDVARVNGQLAVSRAFGDKNLKLHIRSDPDVKDADINAETDILILASDGIWKVMSNQEAVDIGRKTKDPEKAAKQLVSEALSRESKDDISVVVVRFAS 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 18577432 18581865 + Bpe017836.2 Bpe05g00418 104195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00418 316 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 1 185 - -
Bpe05g00418 316 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 214 315 - -
Bpe05g00418 316 Pfam Protein phosphatase 2C 220 307 IPR001932 -
Bpe05g00418 316 Pfam Protein phosphatase 2C 42 183 IPR001932 -
Bpe05g00418 316 Gene3D - 29 316 IPR036457 -
Bpe05g00418 316 ProSiteProfiles PPM-type phosphatase domain profile. 34 314 IPR001932 -
Bpe05g00418 316 CDD PP2Cc 33 314 IPR001932 -
Bpe05g00418 316 SMART PP2C_4 30 312 IPR001932 -
Bpe05g00418 316 SUPERFAMILY PP2C-like 28 314 IPR036457 -
Bpe05g00418 316 PANTHER PROTEIN PHOSPHATASE 2C 1 185 IPR015655 GO:0004722|GO:0006470
Bpe05g00418 316 PANTHER PROTEIN PHOSPHATASE 2C 214 315 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00108 Bpe-Chr2:789816 Bpe05g00418 Bpe-Chr5:18577432 1.19E-139 dispersed
Bpe05g00418 Bpe-Chr5:18577432 Bpe08g01007 Bpe-Chr8:12392406 1.48E-101 dispersed
Bpe05g00418 Bpe-Chr5:18577432 Bpe08g00594 Bpe-Chr8:4303300 7.76E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00418 K17506 - mnt:21400204 455.677