Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00420 GCGATGGACGCAGGAAGTGTCAAAACTTATCTTATTGGTTCGGGCATTTGGCGCACCAAAGGCCTCATTGGCGGCAAATGGACTGATGCATATGATGGGAAGACCATTAAGGTGTACAACCCGGCCACTGGTGAGGAGGTGGCAGATGTTGCATGTATGGGTAAAGGGGAGACAAATGATGCTATCTCTTGTGCCTATGAAGCATTTAAATCTTGGGGCAAGCTCACTGCCATTGAAAGGAGCAAACGCCTTAAAAAATGGTATGATTTATTGATCGCACACAAGGAAGAGCTTGGACAAATTATAACCTTAGAGCAAGGAAAACCTTTTAAGGACGCAGTTGGTGAGGTTGTTTTCGGGGCCAGCTACATTGATTTTTTTGCAGAAGAAGCGAAACGAGTCTATGGTGATATAATTCCATCAACTGTAGCTGATCGTCGGCTTTTGATCTTAAAGCAGCCCGTTGGAGTTGTTGGTGCAATTACACCTTGGAACTTTCCTTTGGCTATGATTGCTCGGAAGGTTGGTCCTGCTCTTGCGTGTGGCTGTACTGTTGTTATAAAACCCTCTGAACTCACACCTCTCACAGCTTTAGCAGCAGCTGAGCTCTCCCTTAAGGCTGGAATTCCCCCTGTAAGGTTAATTGAGACCTTGTTGCGGGACTTTTCTTTTATACTATGTGCTCAGGTAAGAAAGATAACATTCACTGGCTCAACGGCAGTGGGGAAGATGTTGATGGCTCGAGCTGCGGAGACGGTTAAAAAGGTGTCTCTGGAACTTGGTGGCAATGCACCTTGCATTGTGTTTGATGATGCAGATATTGATGTTGCAGTAAAAGGAACCCTTGCTGCAAAGTTCCGAAACACTGGGCAAACTTGTGTATGTGCCAACAGGATTTTTGTTCAAGAAGGTATATACGAAAAATTCGCTGTTGCTTTTTCTGAAGAAGTCCGAAATATGAAGGTTGGACATGGCTTTAGTGAAGGTGTGGTTCAGGTAGTAACTGATACATTTTTCTTGAATTATGATAAGATAATAGATAAGAAGTCAGTGGGAGGAGCAAAAGTTGTTCTGGGAGGTCAAAGGCATAGGCTGGGAATGACCTTTTATGAGCCTACCGTTCTTAAGGATGTCAACAATGACATGCGGATAGCCAGAGAGGAAGTATTTGGTCCTGTGGCACCCTTATTGCGGTTCAGAACTGAGGAGGAAGTAATTTCCCTTGCCAATGACACCAATGCAGGTTGGTTAGCTGCTTATGTATTCACTCAGAATGTTCAACGGTCTTGGCGCATGACTGAATCTCTTGAATACGGCATTGTTGGTGTCAATGAAGGACTCATTTCTACCGAGGATTGCTTGGCGCAGGTTGCTCCATTTGGAGGCTTTAAACAATCAGGGCTTGGTCGGGAAGGTTCGAAATATGGGATGGAGGACTATCTGGAGGTAAGTGTGTTTCATAGATGCTTATCTAATGGATCTTAG 1485 44.58 AMDAGSVKTYLIGSGIWRTKGLIGGKWTDAYDGKTIKVYNPATGEEVADVACMGKGETNDAISCAYEAFKSWGKLTAIERSKRLKKWYDLLIAHKEELGQIITLEQGKPFKDAVGEVVFGASYIDFFAEEAKRVYGDIIPSTVADRRLLILKQPVGVVGAITPWNFPLAMIARKVGPALACGCTVVIKPSELTPLTALAAAELSLKAGIPPVRLIETLLRDFSFILCAQVRKITFTGSTAVGKMLMARAAETVKKVSLELGGNAPCIVFDDADIDVAVKGTLAAKFRNTGQTCVCANRIFVQEGIYEKFAVAFSEEVRNMKVGHGFSEGVVQVVTDTFFLNYDKIIDKKSVGGAKVVLGGQRHRLGMTFYEPTVLKDVNNDMRIAREEVFGPVAPLLRFRTEEEVISLANDTNAGWLAAYVFTQNVQRSWRMTESLEYGIVGVNEGLISTEDCLAQVAPFGGFKQSGLGREGSKYGMEDYLEVSVFHRCLSNGS 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 18586578 18595855 + Bpe017838.2 Bpe05g00420 104197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00420 494 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 16 485 - -
Bpe05g00420 494 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 16 485 - -
Bpe05g00420 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 262 450 IPR016163 GO:0016620
Bpe05g00420 494 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 286 297 IPR016160 GO:0016491
Bpe05g00420 494 Pfam Aldehyde dehydrogenase family 27 484 IPR015590 GO:0016491
Bpe05g00420 494 CDD ALDH_F5_SSADH_GabD 38 483 - -
Bpe05g00420 494 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 33 480 IPR016162 GO:0016491
Bpe05g00420 494 SUPERFAMILY ALDH-like 13 484 IPR016161 GO:0016491
Bpe05g00420 494 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 258 265 IPR029510 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00420 Bpe-Chr5:18586578 Bpe07g00475 Bpe-Chr7:8120640 0 dispersed
Bpe13g00428 Bpe-Chr13:11886052 Bpe05g00420 Bpe-Chr5:18586578 9.87E-33 transposed
Bpe04g00009 Bpe-Chr4:92788 Bpe05g00420 Bpe-Chr5:18586578 3.11E-40 transposed
Bpe05g00420 Bpe-Chr5:18586578 Bpe07g00332 Bpe-Chr7:2577939 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00420 K17761 - mnt:21402189 684.485