Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00481 ATGGATTCTTACTTAAAGAGGAAAATCAAAATGTTGCAGGAACTAGGGGGTCTGAATTCAACACTTGACGAGACACTGGGAGATTCTAATCCACACTACTCGAGAGTTCTAAAAGAAAAAATTGCAGTGAGAGAGGCTGCTAATAGAGCAATGGAGGCTCGAATAGCTGCACTAGTGGAAGCTTCTTGGTGTAGAATACTCCGAGCTGCTCGAATCCAAAATAAAGAAGCAGAAGCCCAGCTTCAAAGTGCAGAGCAAACTGCAGCTGATGCTTTTGAAGCAGCAGCCGCTATTGGAGTCATTATGCATGATTTACCTTGTTGTTCTGAGAAACTGAACGAAATAGAAACATCTTCTCTTGGATTAGGGGGGTCAACTACACATACTGTAAAGACATCTTTCAAAACTGCATTTGAGGTTGAGAAAGAAGTGGCTGCCGCGGTTAAAGCTGCGTTGATCAGGCTTTCAAATTGTTCCTCGTTTAATGAAGACGAATTCAAAGAAATCCTACAAAAGATTAGTCAGAAACCGGATATAACAGTTGAAAATAATACGGATTCATCTACAATTTTATCGGAATGTGAGTCCGAGTCCGGTTCTGAACTTGAAACAGATAGGCAGAATGATAGTCTTCTTGGGTTTCAGGGTTTGGAATCCAAGATTCCAGTCTTGATGAGGAACAGGAAAGGCAGGAGGAGATCGTTTGAAAAGTTGAACATGGAAAAACTGGTAGAAATCATGCTTGAAAAGCTTAAATGCTTGCAAGAGAGAGAAATTTCTTCCCTGGCCACCATAGTTGCAACTTATGGTCTAAATGCTGCTTTAAATGAGTTGGAAAGTGACAAGCCGCATGATACTTCTGTTCATCCTTCAGCTTCAGCTCGCAGCTCACAGGTGAGAAAAAAGGAAGTTGAGGCAGAACTTCCAAGCCTAGACAAGTTCTTGGTGAAGCATTTGACAAAGCTCGAAAGAGAGGTGCAAGAAGCCAAGAAAGACAGAAGGAACGAGTTGAAAGAAACAACCGAAGAGATTGCTAATGCAAATTTGGCTGCGAAAGCTGACGATAATGATAAATTCGAGTCAAATGTTTCAGATTTGGGAAGCATTCTCATGAAGCATTCTTCGAAACTTCAAAAGGAGATTGATGAGGCAAGAGGGAAGGAAAGAAAAGATAATGGCATAAACTGCAAAAAGCATATCGATATTACTCCATCACAGGTCGCTCCTGCTGTAAATGACAGGGCGAAAGGAGTTTCAGAAGTTCCAAGCCTAGACAAAGTTCTAGTAAAGCATGTCTCCAGACTTGAAAGGGAAGTTCAAGAAGCAAAGAATAGAAGAAGAAACAAGGAAAACGTGTATTTTGCTTCTCATGTGGAAATGGAAGAGTCTTCCCAACATATTCAAAAGAAGACTCACCCCTCAGAAGATAGCTTAGATAAGATCTTAGTGAAGCCAGTTCACTGGTGGGAAAGAGAGAAAAGGAAGGCCTTGGCAGCTGAAAACAATAACCAAAATCATAGATATCAGAAGCAAAAGGAAAACAATCCAGCTGACTGTGAGAGCTTAGATAAGGTCTTAGTCAAGCATGTTTCAAGACTGGAGAAGGAGAAAATCAAGCTAAGATCAGAAGAAGAAAAGATAATAGTGAATAAAAGCCAGAAAAACATAAACGAAGAAGGTGGTTTAGACCACATATTGGTTAAACACAAATCGAGACTCGAAAGAGAGAAAATGGTAGCTGCTCAGCAATCAGAAGACGACAGCAGCCATTCAGTAACAGTATCTCGTCGTGATGCGAGGGAGAAAGAGTTGCAAGAAGCATGGGGAGGGCTGAGTTTAGGCAACTCCATCAAACCACATCTTTCCAGACTTGAAAGAGATAAGGCTGCTTGGAAGAAGGCTGAAGAGGAGGAAAGGAGACAAGCCATAAGAGAAAACTTTGTGTAA 1947 41.19 MDSYLKRKIKMLQELGGLNSTLDETLGDSNPHYSRVLKEKIAVREAANRAMEARIAALVEASWCRILRAARIQNKEAEAQLQSAEQTAADAFEAAAAIGVIMHDLPCCSEKLNEIETSSLGLGGSTTHTVKTSFKTAFEVEKEVAAAVKAALIRLSNCSSFNEDEFKEILQKISQKPDITVENNTDSSTILSECESESGSELETDRQNDSLLGFQGLESKIPVLMRNRKGRRRSFEKLNMEKLVEIMLEKLKCLQEREISSLATIVATYGLNAALNELESDKPHDTSVHPSASARSSQVRKKEVEAELPSLDKFLVKHLTKLEREVQEAKKDRRNELKETTEEIANANLAAKADDNDKFESNVSDLGSILMKHSSKLQKEIDEARGKERKDNGINCKKHIDITPSQVAPAVNDRAKGVSEVPSLDKVLVKHVSRLEREVQEAKNRRRNKENVYFASHVEMEESSQHIQKKTHPSEDSLDKILVKPVHWWEREKRKALAAENNNQNHRYQKQKENNPADCESLDKVLVKHVSRLEKEKIKLRSEEEKIIVNKSQKNINEEGGLDHILVKHKSRLEREKMVAAQQSEDDSSHSVTVSRRDAREKELQEAWGGLSLGNSIKPHLSRLERDKAAWKKAEEEERRQAIRENFV 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 19075463 19077669 - Bpe017901.1 Bpe05g00481 104258

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00481 648 Coils Coil 319 350 - -
Bpe05g00481 648 Coils Coil 494 514 - -
Bpe05g00481 648 Coils Coil 237 257 - -
Bpe05g00481 648 Coils Coil 621 641 - -
Bpe05g00481 648 Coils Coil 432 452 - -
Bpe05g00481 648 PANTHER MYOSIN-2 HEAVY CHAIN-LIKE PROTEIN 1 642 - -
Bpe05g00481 648 MobiDBLite consensus disorder prediction 281 301 - -
Bpe05g00481 648 MobiDBLite consensus disorder prediction 580 601 - -
Bpe05g00481 648 Coils Coil 67 94 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00481 - - - zju:107427134 615.535
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g681 Blo02g00938 . . Bda08g00672 . . . . . . . . . . . . . . . . . . . . Cla10g01008 Cam10g1031 Cec10g1062 Cco10g1026 Clacu10g1048 Cmu10g1832 Cre10g1204 . . Cone3ag1018 . . . . . . . . . . Bpe05g00481 . . . Cmo04g00492 Cmo16g00350 . . . . Cpe14g00275 Cpe01g00412 Bhi11g01151 . . . . . . . . . . . . . Lsi03g01036 . . Cme07g02168
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006087 2 6 1 1 1 1 2 1 1 1 1 1 1 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1 1 1 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe05g00481 Bpe_Chr05 FPKM 2.523269 2.749244 3.923995 3.141136 4.698681 4.247894 5.164111 12.377953 12.46629 11.664935