Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00485 ATGGAGAAGAAACAGGGGTTCTTCTCGGCTCTCAAAGAGGAAGTTGTTCGGGGGCTGTCTCCGTCGCGCTCCCGTACCAAAAGTCCGGCGAGAAACGGATCACCTATGTCGGGTTTGCTGTGGAGGAAGAAGAATCATGATAACCATACAATTGCAAGATCCGGTAGTCTTAGGCCGGTGGGAGAGACATTGACGCCGTTAATGGAGGGTCCTGATCCCGATGGAAGCGAAATAGGGGATTCAAAGAGGGTCGGATCGGGTCTGGGCCAGTGGATGAAAGGACAGCTCTCTCGGTCTCCTTCTGTTTCGTCTTCCTCGGCCATCAAGAGTTCTGATCTGAGGCTTCTGCTCGGCGTTATGGGCGCTCCGCTCGCTCCTCTGCACGTCACTTCCTCAGATCCTCTTCCCCACCTTAGTATCAAGGACACCTCCATTGAAACTTCATCAGCCCAGTACATATTGCAACAGTACACAGCTGCAACTGGTGGCCAAAAACTCCAGAACTCGATTAGAAATGCTTACGCCATGGGAAAGGTTAAAATGGTAGCTTCGGAATTCGAAACTGCAACAAGGATAATGAAAAATCGAAATGCCTCTGGATGTGCAGAGTCAGGTGGGTTTGTTCTTTGGCAAATGAACCCGGATATGTGGTATGTTGAGCTAGCCGTAGGAGGCAGCAAAGTCCATGCCGGCTGCAACGGAAAGCTTGTATGGAGGCACACCCCATGGCTTGGTGCTCACACTGCAAAAGGGCCTGTTAGACCTTTGCGCAGAGCTCTTCAGGGTCTTGATCCCAGAACCACTGCAAGTATGTTTGTTAATGCTAGATGCATAGGGGAGAAGATGCTTAATGGCGAAGATTGCTTCATCCTCAAGCTTTGTGCTGACCCTCAGACATTGAAGGCTAGAAGCGAAGGACCTGCGGAGATTATTAGGCATGTTATGTTTGGATACTTCAGCCAGAAAACTGGATTTCTGGTTCACATTGAGGATTCTCATCTCACCCGCATTCAATCCAACGGTGGTGATGCAGTTTACTGGGAAACCACAATAAATTCTTTTCTGGACGATTACAGGCCTGTCGAAGGAATCATGATCGCTCACTCTGGCAGATCAGTTGTGACCCTTTTCAGATTTGGTGAAATGGCTATGAGCCACACCAAAACAAAGATGGAAGAAGCTTGGATTATTGAAGAGGTGGCTTTCAACGTAGCTGGTCTCTCAATCGACTGCTTCATCCCTCCAGCTGATTTGAGATCTACCTCCATTAGTGAAGTTTCTGAGCTTCCACAGGAAGATAGGGGTAAAGGAGCATTGGCTATAGCAACACACTGTGCTAAAGTCGTTGCATTAGAAAAACCTCATGAAGAAATGCCTGATAATATGATTTGGACGACGAAAGAATGA 1407 48.12 MEKKQGFFSALKEEVVRGLSPSRSRTKSPARNGSPMSGLLWRKKNHDNHTIARSGSLRPVGETLTPLMEGPDPDGSEIGDSKRVGSGLGQWMKGQLSRSPSVSSSSAIKSSDLRLLLGVMGAPLAPLHVTSSDPLPHLSIKDTSIETSSAQYILQQYTAATGGQKLQNSIRNAYAMGKVKMVASEFETATRIMKNRNASGCAESGGFVLWQMNPDMWYVELAVGGSKVHAGCNGKLVWRHTPWLGAHTAKGPVRPLRRALQGLDPRTTASMFVNARCIGEKMLNGEDCFILKLCADPQTLKARSEGPAEIIRHVMFGYFSQKTGFLVHIEDSHLTRIQSNGGDAVYWETTINSFLDDYRPVEGIMIAHSGRSVVTLFRFGEMAMSHTKTKMEEAWIIEEVAFNVAGLSIDCFIPPADLRSTSISEVSELPQEDRGKGALAIATHCAKVVALEKPHEEMPDNMIWTTKE 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 19089341 19091405 - Bpe017905.1 Bpe05g00485 104262

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00485 468 MobiDBLite consensus disorder prediction 15 41 - -
Bpe05g00485 468 Pfam Protein of unknown function (DUF620) 174 415 IPR006873 -
Bpe05g00485 468 PANTHER LIPASE 1 466 - -
Bpe05g00485 468 PANTHER LIPASE 1 466 IPR006873 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00485 - - - nta:107825501 793.497
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe04g00163 Bpe05g00485 CCT
Bpe05g00485 Bpe07g00265 CCT
Bpe04g00163 Bpe05g00485 ECH
Bpe05g00485 Bpe07g00265 ECH
Bpe02g01784 Bpe05g00485 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00398 Bpe-Chr2:2584732 Bpe05g00485 Bpe-Chr5:19089341 5.19E-103 dispersed
Bpe03g01166 Bpe-Chr3:30647362 Bpe05g00485 Bpe-Chr5:19089341 1.23E-99 dispersed
Bpe05g00485 Bpe-Chr5:19089341 Bpe12g00029 Bpe-Chr12:264926 1.55E-125 dispersed
Bpe05g00485 Bpe-Chr5:19089341 Bpe07g00265 Bpe-Chr7:1913833 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g665 Blo02g00940 Blo03g00082 Bda06g01212 Bda08g00670 Bpe07g00265 . Bma05g00668 Bma12g00271 . . . . . . . . . . . . . . . . Cla10g01010 Cam10g1033 Cec10g1064 Cco10g1028 Clacu10g1050 Cmu10g1834 Cre10g1206 Cone12ag1059 Cone8ag1093 Cone3ag1013 Cone10ag1030 . . . . . . . . . Bpe05g00485 . . . Cmo04g00494 Cmo16g00351 . . . . Cpe14g00276 Cpe01g00414 Bhi11g01168 Tan01g0658 . . . Mch10g0460 . . . . . . . . Lsi03g01038 . . Cme07g02166
Vvi18g680 . Blo12g00981 . Bda03g00190 . Bpe04g00163 . . Cmo05g00154 Cmo12g00522 Cma01g01799 Cma09g00273 Car01g01405 . Sed07g1274 Cpe06g00188 Cpe07g00507 Bhi04g00397 Tan02g1763 Cmetu05g0170 . Hepe08g1318 . Lcy13g2121 Cla08g01607 Cam08g2108 Cec08g1693 Cco08g1817 Clacu08g1793 . Cre08g1576 . . . . Lsi04g01503 Csa04g02462 . Cme03g02086 . Blo18g00711 Bda08g01367 Bda01g01597 Bpe02g01784 Bpe05g00485 Bma01g00671 . Sed01g2704 Cmo01g01858 Cmo09g00269 Cma12g00584 Cma05g00154 Car05g00134 Car09g00228 Cpe11g00130 Cpe02g00209 Bhi09g03249 Tan01g4717 Cmetu07g2112 . Hepe01g1813 Mch11g0345 . Cla05g02091 Cam05g2244 Cec05g2263 Cco05g2304 Clacu05g2240 Cmu05g2103 Cre05g2227 Lsi08g01511 Csa02g01909 Chy07g00176 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000467 4 3 4 6 4 3 6 3 3 3 3 3 6 3 3 5 3 8 6 3 3 4 3 3 3 3 3 7 4 2 117
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe05g00485 Bpe_Chr05 FPKM 178.359589 187.394928 122.955215 120.197479 222.260468 242.389221 213.81929 101.64621 105.721077 102.159554