Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00502 ATGGGAGGTAACCAGAAGAGTTACAGTGCGAATCCAAATGATTATAAGCTTCTTGAGGAGGTTGGACATGGCGCTAGTGCGACGGTTTACAGAGCGATCTATCTGCCGCTCAATGAAGTGGTGGCTGTCAAGTGCTTGGATCTTGATCGTTGCAATAGCAATCTGGATGACATTCGAAGGGAGGCCCAAACTATGAGTTTAATAGATCATCCAAATGTTGTAAGAGCATATTGCTCATTTGTTGTTGAACGGAACCTATGGGTCATTATGCCATTTATGGCAGAGGGTTCCTGTTTACACCTTATGAAGATAGCATATCCAGATGGCTTTGAAGAGGATGTTATTTGTTCTATACTAAAAGAAACTCTTAAAGCTTTGGACTACCTTCATTGCCAAGGACATATTCACAGAGATGTAAAGGCCGGAAATATACTACTCGATAGCAATGGAGTGGTAAAGCTTGCTGACTTTGGTGTTACTGCTTGCATGTTTGACTCAGGTGATAGGCAACGAGCTAGAAATACTTTCGTTGGGACTCCATGCTGGATGGCACCAGAGGTATTGCAACCAGGAAGTGGATATAATTTCAAGGCTGATATCTGGTCATTTGGTATAACAGCATTGGAGTTGGCTCATGGTCATGCACCATTTTCGAAATATCCTCCAATGAAGGTACTTCTCATGACCATCCAAAATGCCCCTCCAGGGCTAGATTATGATCGTGACAAAAGATTCTCTAAGTCTTTCAAAGAAATGGTTGCAATGTGCCTGGTGAAAGATCAAACAAAGAGGCCTACAGCAGAAAAGCTGTTAAAACACAACTTTTTCAAGAGTGCAAAACCTCCGGAGCTTTCTGTGAAGAAATTATTTGATGACTTACCTCCTCTTTGGAATCGTGTAAAAGCTCTCCAGCTTAAAGATGCAGCGCAGCTAGCTCTGAAGAAAATGCCATCATCCGAACAAGAAGCATTATCACAGAGTGAGTACCAGCGAGGAGTTAGTGCATGGAACTTTGATATTGAGGATTTAAAAGCCCAAGCCTCACTGGTACATGAGGATGATGATGAGAATGATGATGATATGACAGATACGAGGGATCGTGAAGAAATCCTCAAGTCAATTGTTAGTGATAAGGGCAGAGTAAAATCAGTTGGTGTGGAGTTGGTGCAAGGTGAATCCTTCAGCAAAAAGGGTAAGACAACGGAAAACGAGTGGTTTGAATCTGGGACCACCCACGAGAAAAGTGGTTTGAAGAAAAGCGGTACTAGCACTGAAGCATCATCTTTTACATCCAGTCAAGAGATTGTTCAAACAAAGAATAAAACCCAAATGCCAAAAAGTCGGCAAACGCAGAGCGGGCCGCTGATGCCTGGTGTTGTGGTCAGTCATTCTTTATCAGAAAGAGCTCGTAATCCAGAGAGGGATGAGTATGAAATTCAACCAACTGCAGAAAAATCTCAGCGTGATCTGCGACAGACGCCAAGTTTTAGTGGTCCTTTAATGCTGCCAAACCGTGCTTCAGCAAACAGCTTATCAGCACCTATAAAATCTTCTGGAGGATATAGAGATTCATTAGATGACAAGTCAAAGGCTAATCTTGTGCAAATTAAAGGGCGGTTTTCTGTGACGTCAGAAAACTTAGATCTTGCTAAGGATATTCCATTAAGTACAGTACCACGTCGAACTTCCCAGGGATCCCCACTTAGAAAATCAGCTAGTGTCGGTGATTGGATATTTGACTCAAAACAAATGCTCGTCGGTCAATCCCAAAAGGAGCTTTCCAACAGTAATATACCCGCTACACTTCTCATGACTCATCTGCAAACTCTTTTTCAGCAGACCTCAATTCAACAGGATCTTATATTCAATTTGTTTAATACCCTCCAGCCAACTGACGTAGCAGATGCTACTCAAAATGAAAAGTTGCCTCCATTGCCTAGAAACTCAGAGAACAATGGAAGTATTGAAATGGTATCTCCTGAGAGAGAGCGCTTATTACAACTGAGGATCTCAGAACTTCAAGCTAGGTTGATGCATTTGACATACGAACTAAATACCGAAAAGTTGAAGTACATTCAATTGCAAGAGCAGCTGAATACTATATCCTGTCAGGAAGAAAATGGAGATAGGAGAGAAGATAATTGCTGA 2148 41.95 MGGNQKSYSANPNDYKLLEEVGHGASATVYRAIYLPLNEVVAVKCLDLDRCNSNLDDIRREAQTMSLIDHPNVVRAYCSFVVERNLWVIMPFMAEGSCLHLMKIAYPDGFEEDVICSILKETLKALDYLHCQGHIHRDVKAGNILLDSNGVVKLADFGVTACMFDSGDRQRARNTFVGTPCWMAPEVLQPGSGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKRFSKSFKEMVAMCLVKDQTKRPTAEKLLKHNFFKSAKPPELSVKKLFDDLPPLWNRVKALQLKDAAQLALKKMPSSEQEALSQSEYQRGVSAWNFDIEDLKAQASLVHEDDDENDDDMTDTRDREEILKSIVSDKGRVKSVGVELVQGESFSKKGKTTENEWFESGTTHEKSGLKKSGTSTEASSFTSSQEIVQTKNKTQMPKSRQTQSGPLMPGVVVSHSLSERARNPERDEYEIQPTAEKSQRDLRQTPSFSGPLMLPNRASANSLSAPIKSSGGYRDSLDDKSKANLVQIKGRFSVTSENLDLAKDIPLSTVPRRTSQGSPLRKSASVGDWIFDSKQMLVGQSQKELSNSNIPATLLMTHLQTLFQQTSIQQDLIFNLFNTLQPTDVADATQNEKLPPLPRNSENNGSIEMVSPERERLLQLRISELQARLMHLTYELNTEKLKYIQLQEQLNTISCQEENGDRREDNC 715
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 19212117 19225427 - Bpe017922.1 Bpe05g00502 104279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00502 715 CDD STKc_OSR1_SPAK 13 276 - -
Bpe05g00502 715 Gene3D Transferase(Phosphotransferase) domain 1 96 327 - -
Bpe05g00502 715 ProSiteProfiles Protein kinase domain profile. 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00502 715 Pfam Protein kinase domain 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00502 715 MobiDBLite consensus disorder prediction 397 414 - -
Bpe05g00502 715 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 707 - -
Bpe05g00502 715 MobiDBLite consensus disorder prediction 395 505 - -
Bpe05g00502 715 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Bpe05g00502 715 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Bpe05g00502 715 MobiDBLite consensus disorder prediction 467 485 - -
Bpe05g00502 715 SUPERFAMILY Protein kinase-like (PK-like) 12 332 IPR011009 -
Bpe05g00502 715 MobiDBLite consensus disorder prediction 486 505 - -
Bpe05g00502 715 MobiDBLite consensus disorder prediction 415 457 - -
Bpe05g00502 715 SMART serkin_6 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00502 715 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 2 707 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00502 Bpe-Chr5:19212117 Bpe10g00590 Bpe-Chr10:12838124 5.05E-179 dispersed
Bpe05g00502 Bpe-Chr5:19212117 Bpe14g00247 Bpe-Chr14:2619583 1.02E-179 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63354 PF00069 Pkinase 1.50E-59 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00502 - - qlo:115975196 1073.54