Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00520 ATGAGTTTTCAAGATATTGAGGCGGGCCGGCCTTTCGCTTATTCGAAGCGGGAAGTCATCAATGGCAAGCAAGACCCGACGCAAGCCGTCGCCTCTGGTGTATTTCAGATCAATACGGCCGTCGCTACCTTTCAGAGGCTCGTCAATACCTTAGGTACTCCGAAGGACACCCCCGAGCTCCGAGAGAAGCTGCACAAGACAAGGCTTCATATTGGACAGTTGGTGAAAGATACTTCTGCCAGACTTAAACAAGCAAGTGAAATAGATCATCAAACTGAAGTTAAAGCCAGCAAGAAAATTGCGGATGCAAAACTCGCCAAAGACTTTCAAGCAGTGTTGAAAGAATTTCAAAAGGCTCAACGACTTGCAGCTGAGAGAGAAACTGCATATACTCCTTTCGTTCCCCAAGCCGTTCTCCCTTCCGGCTACACAGCCAGCGAGATTGATGTACGATCAGATAAGACTCCTGAGCAGCGTGCACTCCTTGTGGAGTCTAGGAGACAGGAAGTATTGCTTTTGGACAGTGAAATTGCCTTCAATGAGGCGATAATTGAGGAAAGAGAGCAAGGGATTGAAGAAATACAACAACAAATTGGGGAAGTAAATGAGATTTTCAAAGATTTAGCTGTTCTGGTCCATGAGCAGGGAGCCATGATTGATGATATTGGATCTAACATCGAAAGTTCCCATGCGGCTACTGCACAAGGAACAACTCAACTTGTCAAAGCCTCAAAGGCACAGCGATCAAATTCATCTCTGTCCTGCTTACTCTTGGTGATCTTTGGGATTTTGCTTCTCATTGTGATCATACTTGTGGCTGCTTAA 825 45.7 MSFQDIEAGRPFAYSKREVINGKQDPTQAVASGVFQINTAVATFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSARLKQASEIDHQTEVKASKKIADAKLAKDFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSGYTASEIDVRSDKTPEQRALLVESRRQEVLLLDSEIAFNEAIIEEREQGIEEIQQQIGEVNEIFKDLAVLVHEQGAMIDDIGSNIESSHAATAQGTTQLVKASKAQRSNSSLSCLLLVIFGILLLIVIILVAA 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 19384275 19388543 + Bpe017937.1 Bpe05g00520 104297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00520 274 ProSitePatterns Syntaxin / epimorphin family signature. 187 226 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bpe05g00520 274 Gene3D - 174 274 - -
Bpe05g00520 274 PANTHER SYNTAXIN 7 273 IPR045242 -
Bpe05g00520 274 Pfam SNARE domain 218 269 IPR000727 -
Bpe05g00520 274 PANTHER SYNTAXIN OF PLANTS PROTEIN 7 273 - -
Bpe05g00520 274 Pfam Syntaxin-like protein 31 130 IPR006011 GO:0016020
Bpe05g00520 274 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 181 243 IPR000727 -
Bpe05g00520 274 Gene3D - 21 134 - -
Bpe05g00520 274 SUPERFAMILY t-snare proteins 24 236 IPR010989 GO:0016020|GO:0016192
Bpe05g00520 274 CDD SNARE_Qa 184 242 - -
Bpe05g00520 274 CDD SynN 24 149 IPR006011 GO:0016020
Bpe05g00520 274 SMART SynN_4 15 128 IPR006011 GO:0016020
Bpe05g00520 274 SMART tSNARE_6 176 243 IPR000727 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe05g00520 Bpe07g00233 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00520 Bpe-Chr5:19384275 Bpe14g01345 Bpe-Chr14:10726119 3.10E-82 dispersed
Bpe05g00520 Bpe-Chr5:19384275 Bpe07g00233 Bpe-Chr7:1658418 5.70E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00520 - K08488 bhj:120089793 417.542