Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00526 GAGAGAGTGGCTATGGAAGCTCTTTTCTCCAACGACTTCTTTAACTTCATAATCTACGATACAGCAACCCCATATTATTATTCTCAAGACCCTTCAAGTTCAGACAACGCAAATTTCTTACAACATACTAATTTTGTACCTCCAGGTCCAGAAGTTTCAACAGAAAGACGCTCATCAAAGCTCGGAAAAAGCGTTCTGAGCCGGCCGGAAAACTCCGACAGCAGCCGACATTTTGGGCCGCGAAGCCAGAAAAAGAGGAGAAGAAAGGCAAGAGTGTTTAAAAATAACGAGCAGATGGAAACTCAAAGGTTGACTCACATTGCTGTAGAAAGAAACAGAAGAAAACAAATGAATGAACATCTTGCTGTCTTACGTTCTCTCGTGCCTGAATCCTATGCTCGAAGGGGTGATCAAACCTCAATTGTCGGGGGTGCCATAGAGTTTGTGAAAGAGCTTGAGCATCTGTTACAGACCCTTGAAGCCCAAAAGCTGCAACTTGAGCTACAAAAAAAACGAGATCAAAGCCAAATTGAAGAGAAAACTGACTATAAAATGATATTCTCACCTCCCTTCTCACAATTCTTTGGGAACCCACAATTCAATTGGTCTCAAAACCCTAACAAAACTGTACAAGAATCTACTGCCATGGCAGTAGCTGATGTGGAAGTGACTTTGATTGAAACCCATGCAAATCTCAGAATCCTCTCCAGAAAAAACCCTAAAACTCTCTCCTTTTTGGTTGCTGGTTTTCAAGCTCTCTATTTTACAGTTCTCCATCTCAATGTCACCACCATCAACCCTCTTGTTCTTTACTCCATTAGTGCCAAGGTGGAAGAGGAATGTCAATTGAGGTGTGTTGATGACATTGCAGCTGGAGTTCACCAGATGCTTGCTAGAATAATGGAAGAAGAAGGATATTTGCATTGA 927 41.86 ERVAMEALFSNDFFNFIIYDTATPYYYSQDPSSSDNANFLQHTNFVPPGPEVSTERRSSKLGKSVLSRPENSDSSRHFGPRSQKKRRRKARVFKNNEQMETQRLTHIAVERNRRKQMNEHLAVLRSLVPESYARRGDQTSIVGGAIEFVKELEHLLQTLEAQKLQLELQKKRDQSQIEEKTDYKMIFSPPFSQFFGNPQFNWSQNPNKTVQESTAMAVADVEVTLIETHANLRILSRKNPKTLSFLVAGFQALYFTVLHLNVTTINPLVLYSISAKVEEECQLRCVDDIAAGVHQMLARIMEEEGYLH 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 19446938 19448732 + Bpe017943.1 Bpe05g00526 104303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00526 308 Coils Coil 149 181 - -
Bpe05g00526 308 PANTHER MAX DIMERIZATION, MAD 4 304 - -
Bpe05g00526 308 MobiDBLite consensus disorder prediction 38 97 - -
Bpe05g00526 308 PANTHER TRANSCRIPTION FACTOR BHLH71 4 304 - -
Bpe05g00526 308 SMART finulus 107 158 IPR011598 GO:0046983
Bpe05g00526 308 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 101 169 IPR036638 GO:0046983
Bpe05g00526 308 Pfam Helix-loop-helix DNA-binding domain 102 153 IPR011598 GO:0046983
Bpe05g00526 308 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 101 152 IPR011598 GO:0046983
Bpe05g00526 308 Gene3D - 93 172 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00526 Bpe-Chr5:19446938 Bpe11g01364 Bpe-Chr11:10212970 4.14E-62 dispersed
Bpe05g00526 Bpe-Chr5:19446938 Bpe14g00778 Bpe-Chr14:5923313 1.46E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21441 PF00010 HLH 3.60E-10 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00526 - - pvu:PHAVU_003G284500g 308.145