Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00535 ATGGGAGGTGGATTGTCGAGCCTCGTCTCGTGCCTGAAACCGGTGAACCGGACGGATGGACAGCCGGAGCAGAATCCGACCCACCAGCAGGAAGTGGTCTTCGCGGCCTCGGAGCCGCTGGATGAAACCCTAGGCCACTCCTTCTGCTACGTCCGCTCTTCGGCTCGCTTCCTCTCACCGACTCCCTCCGATCGTTTTCTGTCCCCTTCTCATTCTCTCCGTTTCTCGCCTCCTCATGAACCCGCCGTCCAGAGGACTCGACCGCCGGTTCCGGAGACCGGGTTCAAGGCCATTTCCGGAGCTTCTGTCAGTGCGAATAGCGCTACTCCCAGATCTGTCCTTCTGCTTGACAATATTTACGATGATGCCACTGAGAGCACGTTTGGTACCGGCGGCGGTGTGAGAGGGAGTATCGTGAATGGTTTCGAGAGTACGTCGTCATTTAGTGCTCTTCCTCTTCAGCCCGTTCCCAGAGGTGGAGCTGAGCCGTCTGGTCCAATGGAGCGGAGTGGATTCTTTCTGTCTGGTCCGATCGAGCGCGGCGCTCTCTCTGGTCCACTAGAAGCTAACACTGGCTCTGATGGAAGTGGGAGAGTTCCCTTCTCGGCTCCGCTCGGTGGGCTTTATGGAAAGAAAAGACGAAAGAAGGGAATTTCAGGTATTCGGAAGGCCTTCTACCGGAACTTCTCGGAGAAGAGGCCGTGGGTGGTGCCAGTGCTCAATTTTGCATTCAAGAAGGAAGACGGGGCTGCCAGGGATGAGTCGGAGCCAAAGAATGAGAGTGATGTTCAATGGGCACTTGGGAAGGCCGGGGAGGATAGAGTGCATGTGGTTGTATCCGAAGAGCAAGGATGGTTGTTTGTGGGGATTTATGATGGGTTTAATGGTCCTGATGGTCCCGAATTTTTGATGGGTAATCTGTATCGGGCTGTATATAACGAGCTTCAGGGTTTGTTTTGGGAGGTTGAAGAGGTAGAGGAGCCTTCTGATGGCAATCATACTAATGCAGCTTCAGAACATGCATTGGATGATGCTGGGCAAGTAGTTGACAAAGGTGGTTATGTTTCATCAGGGTTTAATGGTTCACACCTTCCCACTGCTGGATCGGCCAAAAGAGTTACATTTCAATCAGAGGAAGGATCTGAAACTAGGAGTAGAAGGCAGCTTTGGGAATTTTTGGCAGATGATGATCCTGAATATGGGCTTGATCTTTCTGGATCAGATAGATTTGCATTTTCAGTTGATGATGCACTTAGTGTAAGCAATGCAGGTTCAGCAGCTGGAAGGCGGTGGCTGCTGTTGTCTAAATTGAAACATGGGTGGTCTAAGCACAAGGAAGGTCATGGTCGAAAGTTGTTTTCATGGAGTTTTAGATTAGAGGATAAAGAGAAGGTTGAGGTCGAGAATAAGGTAGAGGAGAGGCCATTGCGCCCTGGGAAGAAGAGGAAGGAGGGTCCAGTGGATCATGGGTTGGTTTTGGGAGCATTATCACGGGCTTTGGAAGTAACTGAGTTAGCTTATTTGGATATGACAGACAAGGTTCTTAATACAAACCCTGAGCTTGCATTGATGGGATCCTGCCTGTTGGTTGTGTTAATGAGAGATGAGGATGTGTATGTCATGAATGTTGGCGATAGTCGGGCAATTGTTGCCCAGTTTGAACCACAAGAAGTTGGTCATTGTGCAGAGTCGGTGGAACAGGGTGAAGAAAGATCTGAGATGGAAGGTATAATGGAGGAATCATCAGCTCCGAGTGGAAGGGACAATGCCAAAGCAATAACATCCAGAAATGAATTTTCTAGACAAGAAATAACTTTGATTGCATTGCAATTATCAACTGATCATAGCACAAGCATTGAAGATGAAGTCACAAGGATAAAGAATGAGCATCCGGATGACAAACACTGTATTGTTAATGATAGAGTGAAAGGTCGTCTCAAAGTTACAAGGGCATTTGGCGCAGGATTTCTTAAACAGAAAATATACTTTAAACTTTTTCTAACATGCTTTGAAGGGATGGATTTTCATGAATTATTGGACATTCCCCAGGGAGATCGTCGTAAATATCACGATGATGTGACTGTGATGGTTATTTCGCTCGAAGGAAGAATTTGGAAATCCTCAGGGAAGTACCTTTGA 2139 48.06 MGGGLSSLVSCLKPVNRTDGQPEQNPTHQQEVVFAASEPLDETLGHSFCYVRSSARFLSPTPSDRFLSPSHSLRFSPPHEPAVQRTRPPVPETGFKAISGASVSANSATPRSVLLLDNIYDDATESTFGTGGGVRGSIVNGFESTSSFSALPLQPVPRGGAEPSGPMERSGFFLSGPIERGALSGPLEANTGSDGSGRVPFSAPLGGLYGKKRRKKGISGIRKAFYRNFSEKRPWVVPVLNFAFKKEDGAARDESEPKNESDVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDGPEFLMGNLYRAVYNELQGLFWEVEEVEEPSDGNHTNAASEHALDDAGQVVDKGGYVSSGFNGSHLPTAGSAKRVTFQSEEGSETRSRRQLWEFLADDDPEYGLDLSGSDRFAFSVDDALSVSNAGSAAGRRWLLLSKLKHGWSKHKEGHGRKLFSWSFRLEDKEKVEVENKVEERPLRPGKKRKEGPVDHGLVLGALSRALEVTELAYLDMTDKVLNTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQFEPQEVGHCAESVEQGEERSEMEGIMEESSAPSGRDNAKAITSRNEFSRQEITLIALQLSTDHSTSIEDEVTRIKNEHPDDKHCIVNDRVKGRLKVTRAFGAGFLKQKIYFKLFLTCFEGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 19525110 19529942 - Bpe017952.2 Bpe05g00535 104312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00535 712 MobiDBLite consensus disorder prediction 566 589 - -
Bpe05g00535 712 PANTHER PROTEIN PHOSPHATASE 2C 25 663 IPR015655 GO:0004722|GO:0006470
Bpe05g00535 712 PANTHER PROTEIN PHOSPHATASE 2C 672 710 IPR015655 GO:0004722|GO:0006470
Bpe05g00535 712 Pfam Protein phosphatase 2C 609 660 IPR001932 -
Bpe05g00535 712 CDD PP2Cc 488 700 IPR001932 -
Bpe05g00535 712 ProSiteProfiles PPM-type phosphatase domain profile. 257 700 IPR001932 -
Bpe05g00535 712 PANTHER PROTEIN PHOSPHATASE 2C 29 25 663 - -
Bpe05g00535 712 PANTHER PROTEIN PHOSPHATASE 2C 29 672 710 - -
Bpe05g00535 712 Gene3D - 241 669 IPR036457 -
Bpe05g00535 712 MobiDBLite consensus disorder prediction 1 28 - -
Bpe05g00535 712 MobiDBLite consensus disorder prediction 11 28 - -
Bpe05g00535 712 SUPERFAMILY PP2C-like 268 701 IPR036457 -
Bpe05g00535 712 SMART PP2C_4 256 698 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00133 Bpe-Chr1:781777 Bpe05g00535 Bpe-Chr5:19525110 1.06E-42 dispersed
Bpe05g00535 Bpe-Chr5:19525110 Bpe07g00222 Bpe-Chr7:1564661 8.07E-21 dispersed
Bpe05g00535 Bpe-Chr5:19525110 Bpe08g00104 Bpe-Chr8:562872 2.04E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00535 - - jre:108994087 883.634