Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00612 ATGGCCGAAAGGGTGAATACTCCCAGCTCTTTGCAGACTCATTTTGTCGATATACATGAAGTTCTACACGAAGAAGAGGAGGACGAAGAAGGGGACGGGGAAGGTACAAAAGGGTCGGAGAAGCAAGTAAACAGCCCATTGAGGCTGAAAGAAATGAAGAGAAACCAGAGAAGTTTAAGCAGACAAGTTTCCCTAGAGACCGGTTTTTCAGTGCTGATGAAGAGAGAATCAGCGAAGAATGAGAGAATGATTCTCCCAAGAAGTGGGAGAAGCTTTGGAGGGTTTGATTCTGCAAGGAGAATGGGAATGGAGGGGAGAAAAGGAGATTTCAGTATTTTTAGAACAAAGTCTGCAATCAGCAAGCAAAATTCTCTGCTGCCAACAAAGAAAGACAGAGATGTGGATTCTCAGAAAAATGGTGGATATGGAGAAGGAGATGAGTCTATTAATAACAGTGTTTCTGCAGGGAGATACTTTGCTGCTCTGACTGGACCTGAACTTGATCAAGTCAAGGATTCTGAAGATATTCTTCTCCCCAAAGACGAGAAATGGCCATTTCTTCTTCGTTTTCCGATCGGATGCTTCGGTATTTGTCTCGGATTGAGCAGCCAAGCAGTGCTGTGGCGAGCCTTAGCCACCAGTCCAGCCACCCGGTTTCTCCACATTACACCAATTGTGAACTTGACCCTCTGGCTCATTGCACTTCTAGCTCTTCTCTCTGTCTCTTTTACTTATCTTCTCAAATGCATCTTCTACTTTGAGGCTGTCCGCAGAGAATACTTCCATCCCGTTCGAGTAAACTTCTTCTTCGCTCCTTGGGTCGTCTGCATGTTCTTAGCCATCTCTGTACCCACTTCGCTTGCATCTGACACCCTTCACCCAGCTATATGGTGTGTTTTCATGGCACCCTATTTTCTCCTCGAGCTCAAGATTTATGGGCAATGGCTGTCAGGAGGAAAAAGAAGACTTTGTAAAGTGGCTAATCCTTCTTCTCATCTCTCAGTTGTGGGCAACTTTGTGGGGGCTATTTTGGCTGCAAGAGTGGGGTGGGATGAGGCTGGGAAGTTTTTGTGGGCAATTGGGTTCGCTCACTATCTTGTTGTGTTTGTGACTTTGTATCAGAGATTGCCTACCAGTGAAGTTTTGCCTAAGGAATTGCACCCGGTTTACTCCATGTTTATAGCCGCTCCATCTGCTGCTAGCATTTCTTGGCAAGCCCTTTATGGTGATTTTGATGGATTGGCCAGGAATTGCTACTTCATTGCTTTGTTTCTTTTTGTTTCTCTTGTAGTTCGGATCAACTTCTTCACCGGCTTTCAATTTTCAGTGGCATGGTGGTCTTACACTTTCCCCATGACAACAGTTTCAGTGGCTACCATCAAGTATGCAGAGCAAGTTCCAACAGTTCCAAGCAAAGGCCTTGCCTTGACTCTTTCATTCATGTCGTCGGCAATGGTGTCTCTTCTATTTGTCTCCACTCTCCTTCATGCTTTTGTTTGGAAGACTTTGTTTCCAAATGATTTAGCCATTGCTATAACAAAGAGAAGACAAGTTAAAGAGAAGAAACCATTAAGAAAAGCCTATGATATCAGACGCTGGACTAAGCAAGCTTTGGCCAAACACAATTCCATAAACAAAGATTTAGATGGACAACAAGAAGCAGCATATTAA 1671 44.17 MAERVNTPSSLQTHFVDIHEVLHEEEEDEEGDGEGTKGSEKQVNSPLRLKEMKRNQRSLSRQVSLETGFSVLMKRESAKNERMILPRSGRSFGGFDSARRMGMEGRKGDFSIFRTKSAISKQNSLLPTKKDRDVDSQKNGGYGEGDESINNSVSAGRYFAALTGPELDQVKDSEDILLPKDEKWPFLLRFPIGCFGICLGLSSQAVLWRALATSPATRFLHITPIVNLTLWLIALLALLSVSFTYLLKCIFYFEAVRREYFHPVRVNFFFAPWVVCMFLAISVPTSLASDTLHPAIWCVFMAPYFLLELKIYGQWLSGGKRRLCKVANPSSHLSVVGNFVGAILAARVGWDEAGKFLWAIGFAHYLVVFVTLYQRLPTSEVLPKELHPVYSMFIAAPSAASISWQALYGDFDGLARNCYFIALFLFVSLVVRINFFTGFQFSVAWWSYTFPMTTVSVATIKYAEQVPTVPSKGLALTLSFMSSAMVSLLFVSTLLHAFVWKTLFPNDLAIAITKRRQVKEKKPLRKAYDIRRWTKQALAKHNSINKDLDGQQEAAY 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 20074685 20076641 - Bpe018028.1 Bpe05g00612 104389

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00612 556 Gene3D - 186 504 IPR038665 -
Bpe05g00612 556 PANTHER GUARD CELL S-TYPE ANION CHANNEL SLAC1 8 552 - -
Bpe05g00612 556 PANTHER - 8 552 IPR030183 GO:0006873|GO:0008308|GO:0016021
Bpe05g00612 556 MobiDBLite consensus disorder prediction 1 47 - -
Bpe05g00612 556 MobiDBLite consensus disorder prediction 126 140 - -
Bpe05g00612 556 CDD TDT_SLAC1_like 189 493 - -
Bpe05g00612 556 Pfam Voltage-dependent anion channel 190 494 IPR004695 GO:0016021|GO:0055085
Bpe05g00612 556 MobiDBLite consensus disorder prediction 124 148 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00612 - - - zju:107434623 852.047
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00251 Bpe-Chr3:3395134 Bpe05g00612 Bpe-Chr5:20074685 1.32E-157 dispersed
Bpe05g00612 Bpe-Chr5:20074685 Bpe12g00360 Bpe-Chr12:8855672 1.55E-124 dispersed
Bpe05g00612 Bpe-Chr5:20074685 Bpe07g01000 Bpe-Chr7:15694239 1.67E-166 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g448 Blo02g01074 . . . Bpe05g00612 . . . Cmo06g00762 Cmo16g01074 . . . . . Cpe14g00848 . . . . . . . . Cla10g00315 Cam10g0330 Cec10g0343 Cco10g0335 Clacu10g0326 Cmu10g1166 Cre10g0576 . . Cone6ag0727 Cone9ag0733 Lsi07g01364 . . Cme06g02649 . . . . . . Bma05g00792 . . . . Cma06g00740 Cma16g01028 . Car16g00979 Cpe08g00780 . . . . . . . . . . . . . . . . Csa03g00338 Chy06g01987 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008638 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 1 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe05g00612 Bpe_Chr05 FPKM 44.119087 42.341743 17.98509 18.112219 16.765871 15.71626 14.551824 202.238907 201.000748 198.114014