Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00621 ATGGAGAGGTTTGTCTTCTTCTCCATCATCCTTATTTCGGTCATCGCAGGAAAATCAGCCATCGCGGGTCCTGTCTTTAAGCCAAGCCCATGGAAACTCGCTCATGCAACTTTTTACGGGGACGAAACGGCCTCTGAAACCATGGGAGGGGCATGTGGGTATGGAAACTTGTTCGTGAATGGGTACGGAACAAACACAGCTGCACTCAGCTCAACGCTGTTCAATAACGGATACGCATGTGGGACTTGTTACCAAATAAAATGCTTTCAAGCAAAGGCATGCTACACAAAAGTTGCTTACACTACTGTCACAGCCACCAACCTATGTCCTCCTAACTGGTCTCAAGACTCCAATGCTGGTGGTTGGTGCAATCCGCCGAGAGTTCACTTCGACATGTCCAAGCCCGCCTTCATGAAAATCGCATACTGGAAAGCAGGCATTGTCCCCGTCCTCTACCGGAGGGTACCGTGCGCGAGGAAGGGCGGATTGAGACTCAGCTTTCAAGGAAACGGATATTGGCTGCTCGTGTACGTAATGAACGTAGGAGGAGGGGGAGATTTAGTGACAATGCAAGTGAAAGGAAGCAAGACAGGGTGGATAAGCATGAGTCACAACTGGGGAGCTTCGTACCAAGCATTTGCTACATTGGGTGGCCAATCTCTATCCTTTAGGCTCACTTCCTACACTTCTAAAGAGACTATTTATGCTTGGAATGTTGCTCCTTCTAATTGGCGAGTTGGATTGACCTATCAATCTTATGTAAACTTCCATTGA 774 48.06 MERFVFFSIILISVIAGKSAIAGPVFKPSPWKLAHATFYGDETASETMGGACGYGNLFVNGYGTNTAALSSTLFNNGYACGTCYQIKCFQAKACYTKVAYTTVTATNLCPPNWSQDSNAGGWCNPPRVHFDMSKPAFMKIAYWKAGIVPVLYRRVPCARKGGLRLSFQGNGYWLLVYVMNVGGGGDLVTMQVKGSKTGWISMSHNWGASYQAFATLGGQSLSFRLTSYTSKETIYAWNVAPSNWRVGLTYQSYVNFH 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 20140121 20141377 - Bpe018037.1 Bpe05g00621 104398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00621 257 PANTHER EXPANSIN-A15 6 257 IPR002963 GO:0009664
Bpe05g00621 257 PANTHER EXPANSIN-A7 6 257 - -
Bpe05g00621 257 PRINTS Expansin signature 137 150 IPR002963 GO:0009664
Bpe05g00621 257 PRINTS Expansin signature 173 194 IPR002963 GO:0009664
Bpe05g00621 257 PRINTS Expansin signature 101 111 IPR002963 GO:0009664
Bpe05g00621 257 PRINTS Expansin signature 120 137 IPR002963 GO:0009664
Bpe05g00621 257 PRINTS Expansin signature 61 75 IPR002963 GO:0009664
Bpe05g00621 257 PRINTS Expansin signature 161 173 IPR002963 GO:0009664
Bpe05g00621 257 PRINTS Expansin signature 238 254 IPR002963 GO:0009664
Bpe05g00621 257 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 172 252 IPR007117 -
Bpe05g00621 257 SUPERFAMILY Barwin-like endoglucanases 30 180 IPR036908 -
Bpe05g00621 257 SMART dpbb_1 66 152 IPR007112 -
Bpe05g00621 257 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 162 IPR007112 -
Bpe05g00621 257 SUPERFAMILY PHL pollen allergen 159 252 IPR036749 -
Bpe05g00621 257 Gene3D - 162 257 IPR036749 -
Bpe05g00621 257 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Bpe05g00621 257 PRINTS Expansin/Lol pI family signature 238 252 IPR007118 GO:0005576
Bpe05g00621 257 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Bpe05g00621 257 PRINTS Expansin/Lol pI family signature 145 161 IPR007118 GO:0005576
Bpe05g00621 257 PRINTS Expansin/Lol pI family signature 48 66 IPR007118 GO:0005576
Bpe05g00621 257 PRINTS Expansin/Lol pI family signature 199 213 IPR007118 GO:0005576
Bpe05g00621 257 Pfam Expansin C-terminal domain 166 241 IPR007117 -
Bpe05g00621 257 Pfam Lytic transglycolase 66 152 IPR009009 -
Bpe05g00621 257 Gene3D - 17 158 IPR036908 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe05g00621 Bpe07g00136 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00621 Bpe-Chr5:20140121 Bpe04g01713 Bpe-Chr4:22972599 1.97E-92 dispersed
Bpe05g00621 Bpe-Chr5:20140121 Bpe07g00136 Bpe-Chr7:970875 3.15E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00621 - - tcc:18606420 437.958