Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00631 ATGGCGACTTCTTCTTCTTCTTCTTCAGGCACCGGAAGCAGCTATGATACGCCGTGGGTGGAGAAGTACAGGCCAAACAAGGTCGCAGACATTGTTGGAAATGAAGACGCTGTTTCAAGGCTCCAAGTCATTGCTCGCGATGGGAACATGCCAAACCTCATCTTAGCCGGGCCTCCTGGAACTGGGAAAACAACTAGCATACTTGCTCTTGCGCACGAGCTGTTAGGACCAAATTACAAGGAGGCTGTGTTGGAGCTAAATGCATCTGATGACAGGGGAATAGATGTTGTAAGGAATAAAATTAAAATGTTTGCCCAGAAAAAAGTAACTCTGGCACCGGGCAAGCATAAAATAGTTATCTTGGATGAAGCTGATAGCATGACATCTGGAGCACAACAAGCTTTGAGGAGGACTATGGAAATATATTCAAACACTACCCGCTTTGCTCTTGCATGCAATACATCTGCAAAAATAATTGAGCCTATTCAGAGTAGATGTGCGATTGTCAGATATTCAAGATTATCTGATCAAGAGATACTTGGTCGTCTGATGGTGGTTATTCAAGCTGAAAGGGTTCCCTATGTGCCAGAGGGCCTTGAGGCAATCATCTTTACAGCTGATGGAGACATGAGACAGGCATTGAACAACTTACAAGCTACATACAGCGGATTTCGATTTGTAAACCAAGACAATGTGTTCAAGGTCTGTGATCAGCCTCATCCGTTGCATGTGAAGAACATGGTACGTAACGTGATTGAAGGAAAATTTGACGAAGCTTGTTCAGGTTTGAAGCAACTATACGACTTGGGTTATTCTCCCACTGACATCATCACAACCCTTTTCCGCATCATTAAAAACTATGACATGGCTGAGTTTCTGAAATTGGAATTTATGAAGGAAACTGGGTTTGCCCATATGAGAATTTGTGATGGAGTTGGTTCATATCTTCAGTTATGTGGTCTTTTGGCCAAACTTTCTATTGCACGTGTAACAGCCCAAGCTGAATGA 1008 43.15 MATSSSSSSGTGSSYDTPWVEKYRPNKVADIVGNEDAVSRLQVIARDGNMPNLILAGPPGTGKTTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLAPGKHKIVILDEADSMTSGAQQALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCAIVRYSRLSDQEILGRLMVVIQAERVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQDNVFKVCDQPHPLHVKNMVRNVIEGKFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEFLKLEFMKETGFAHMRICDGVGSYLQLCGLLAKLSIARVTAQAE 335
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 20196570 20198400 - Bpe018047.2 Bpe05g00631 104408
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00631 335 Gene3D - 11 174 IPR027417 -
Bpe05g00631 335 Gene3D - 175 238 - -
Bpe05g00631 335 Gene3D - 239 330 - -
Bpe05g00631 335 PANTHER REPLICATION FACTOR C SUBUNIT 2 7 332 - -
Bpe05g00631 335 CDD HLD_clamp_RFC 174 236 - -
Bpe05g00631 335 Pfam ATPase family associated with various cellular activities (AAA) 53 171 IPR003959 GO:0005524|GO:0016887
Bpe05g00631 335 Pfam Replication factor C C-terminal domain 239 324 IPR013748 -
Bpe05g00631 335 CDD AAA 32 169 - -
Bpe05g00631 335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 237 IPR027417 -
Bpe05g00631 335 SMART AAA_5 49 175 IPR003593 -
Bpe05g00631 335 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 7 332 - -
Bpe05g00631 335 SUPERFAMILY post-AAA+ oligomerization domain-like 238 328 IPR008921 GO:0003677|GO:0006260
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00011 Bpe-Chr4:114133 Bpe05g00631 Bpe-Chr5:20196570 3.15E-63 dispersed
Bpe05g00631 Bpe-Chr5:20196570 Bpe14g00388 Bpe-Chr14:3651418 4.23E-69 dispersed
Bpe08g00232 Bpe-Chr8:1315721 Bpe05g00631 Bpe-Chr5:20196570 5.43E-14 transposed
Bpe13g00897 Bpe-Chr13:15027056 Bpe05g00631 Bpe-Chr5:20196570 6.72E-17 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00631 K10755 - qsu:111999495 611.683