Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe05g00632 | AGACAAGGTGAAGCTTTGAAAATGGCTTCCTCCGACGGCCTCGTCGACTCGACGCCGTTTCTGGCGAATCATAGCCGATCTTCTAGCGAAACGAATTCCAGCAGTCGATTTGTGCAGAGGCAGAGCCTGCGTCAGGCGGCGAGGTTTTTGAGGCAAGCGAGCAGTCGGAGGACGTTGCGCGAGTCCTCGATGCGGGTGAGAGAGACTGCAGCGGAGCAATTGGAGGAGAGGCAGAGTGATTGGGCGTATTCCAAACCGATTGTGATTCTAGATATCGTTTGGAATGTCGCATTTGTGGCCGTGGCTGCTATAATACTGGTTCTGAGCCGTAAGGAGTCTCCGAATGTGCCGTTGAGACTGTGGCTCGCGGGATATGGTTTCCAATGCGTTCTTCATATAGTGTGTGTTTGTTCCGAATATATACGTCGCAGACAACGGCTCCGAATTCACATGGTTAATTCTGTCGGAGACGGAAACCAGACTCCCCGGGGATCAAGTTCCGGTTCGAGGCAGAATTTATCGTTGGGGCAATTAAATGAGGAGCAGCCGAGCGTTGCAAAACACCTCGAGTCTGCAAATACGATGTTTTCGTTCGTCTGGTGGATTGTTGGATTCTATTGGGTCTCATCTGGAAGTCAAGGTTTAGCTCATGCCTCTCCTCTGCTTTACTGGCTGTGCCTAATCTTCTTAGGATTCGATGTGTTTTTTGTCATATTCTGCGTTGCTTTGGCCTGTGTAATCGGCATCGCTGTTTGTTGCTGTCTCCCATGTATTATTGCGCTTCTATATGCTGTGGCTGACCAGTTTTGTAAGCTTTGTTCGATTCTACGGTCGAAATTTTCACTATCGCACTCGATTGATCTTTCCCCCATTTCACCATTTTGTGGAGAATTCACACACTCCAATTTGTTGTTTCATGATTTGTATGAAGAATGCTGCATCTGCCTTTCTGCTTATGATGATGGAGTTGAACTGAGGGAACTTCCTTGTGGCCACCATTTTCACTGTACATGCATAGACAAATGGCTACACATTAATGCTACTTGTCCGCTCTGTAAATACAACATTCTGAAGTTTAACATCCACGGACAAGACGAAGTTTGA | 1104 | 47.37 | RQGEALKMASSDGLVDSTPFLANHSRSSSETNSSSRFVQRQSLRQAARFLRQASSRRTLRESSMRVRETAAEQLEERQSDWAYSKPIVILDIVWNVAFVAVAAIILVLSRKESPNVPLRLWLAGYGFQCVLHIVCVCSEYIRRRQRLRIHMVNSVGDGNQTPRGSSSGSRQNLSLGQLNEEQPSVAKHLESANTMFSFVWWIVGFYWVSSGSQGLAHASPLLYWLCLIFLGFDVFFVIFCVALACVIGIAVCCCLPCIIALLYAVADQFCKLCSILRSKFSLSHSIDLSPISPFCGEFTHSNLLFHDLYEECCICLSAYDDGVELRELPCGHHFHCTCIDKWLHINATCPLCKYNILKFNIHGQDEV | 367 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 20199940 | 20201698 | + | Bpe018048.1 | Bpe05g00632 | 104409 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe05g00632 | 367 | SMART | ring_2 | 312 | 352 | IPR001841 | - | |
Bpe05g00632 | 367 | MobiDBLite | consensus disorder prediction | 16 | 38 | - | - | |
Bpe05g00632 | 367 | CDD | RING-H2_RNF111_like | 310 | 355 | - | - | |
Bpe05g00632 | 367 | ProSiteProfiles | Zinc finger RING-type profile. | 312 | 353 | IPR001841 | - | |
Bpe05g00632 | 367 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Bpe05g00632 | 367 | SUPERFAMILY | RING/U-box | 308 | 358 | - | - | |
Bpe05g00632 | 367 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 297 | 360 | IPR013083 | - | |
Bpe05g00632 | 367 | Pfam | Ring finger domain | 311 | 353 | IPR001841 | - | |
Bpe05g00632 | 367 | PANTHER | TARGET OF ERK KINASE MPK-1 | 310 | 367 | - | - | |
Bpe05g00632 | 367 | PANTHER | TARGET OF ERK KINASE MPK-1 | 7 | 268 | - | - | |
Bpe05g00632 | 367 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 310 | 367 | - | - | |
Bpe05g00632 | 367 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 7 | 268 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe05g00632 | Bpe-Chr5:20199940 | Bpe10g00999 | Bpe-Chr10:15412528 | 5.03E-101 | dispersed | |
Bpe14g01000 | Bpe-Chr14:7388684 | Bpe05g00632 | Bpe-Chr5:20199940 | 5.42E-121 | wgd | |
Bpe05g00632 | Bpe-Chr5:20199940 | Bpe07g00121 | Bpe-Chr7:869422 | 9.16E-180 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe05g00632 | - | - | csv:101209228 | 463.766 |