Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00659 ATGGCAGATTGGGGTTTGCAGGCAATAGTGAGAGGATCCTGCAGCGGTGAGACTGATACTCCAGTTTATAATATTATGGGTTCTGATGAACATTCTTGTTTTGCTGCTCCTTTTAGCTTCGTCGGAGATGATTTGTCTCAGATTTTTCCGGATTATTTTGGAAATAATACCAGTTTTGGGGAATTGGAAGGTCTGTTTAAGCCTTTTTGTCCCCCCGTTTTGCACCCTTTTCCCCCTCCGATTATGGTTACTTCCTCCATTTCTCTTCCCAGAGATCAAATCAAGGATGGCCCTGAGAAAAATCAGCAGAAGAACCAGAATACTTCTGCAACTAAATGTAAAACCAGCAAGAAGAACCAGCAAACTAGGGTAGTGAAAGAGGTTTCAGCGGACGGAATATCTTCCGATGTGTGGGCATGGAGAAAATATGGTCAAAAACCGATAAAGGGTTCGCCCTATCCGAGAAGCTACTACAGATGCAGCAGCTCAAAGGGATGCTCCGCCAGAAAACAAGTGGAACGAAGCTATTCCGATCCCTCCATCTTCACCATAACCTATACATCAGATCACAACCACGCCCACCCCACTCGCCGGAACTCTCTCGCCGGAAGCACCCGGAACAAGTTTCCGAAGTCGAAAAACACGGAAAACAACTGTAATACCCCCACATTCAACAAAGAAAACATGTTATCTCCTGCTTCTGCTTCAATGACTTCTAACGAAGAGGAGGTTGAGTTCATCATTAGAATGAAGAAGGAAAAAGAACAGGTCATGGAAGAAGGCGACAGTGCTGAAGTTTTCTTGCCTGGTTTTTTCTCCAACGATGATTTGTTTCCAAGCGTAGAAGAATTGCTCTTCGGGTAG 864 44.68 MADWGLQAIVRGSCSGETDTPVYNIMGSDEHSCFAAPFSFVGDDLSQIFPDYFGNNTSFGELEGLFKPFCPPVLHPFPPPIMVTSSISLPRDQIKDGPEKNQQKNQNTSATKCKTSKKNQQTRVVKEVSADGISSDVWAWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSYSDPSIFTITYTSDHNHAHPTRRNSLAGSTRNKFPKSKNTENNCNTPTFNKENMLSPASASMTSNEEEVEFIIRMKKEKEQVMEEGDSAEVFLPGFFSNDDLFPSVEELLFG 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 20336426 20337379 + Bpe018072.1 Bpe05g00659 104436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00659 287 Gene3D WRKY domain 117 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe05g00659 287 Pfam WRKY DNA -binding domain 136 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe05g00659 287 MobiDBLite consensus disorder prediction 190 236 - -
Bpe05g00659 287 SMART WRKY_cls 134 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe05g00659 287 SUPERFAMILY WRKY DNA-binding domain 132 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe05g00659 287 MobiDBLite consensus disorder prediction 100 119 - -
Bpe05g00659 287 MobiDBLite consensus disorder prediction 197 236 - -
Bpe05g00659 287 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 3 284 - -
Bpe05g00659 287 MobiDBLite consensus disorder prediction 91 119 - -
Bpe05g00659 287 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 284 IPR044810 GO:0003700
Bpe05g00659 287 ProSiteProfiles WRKY domain profile. 129 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00659 Bpe-Chr5:20336426 Bpe11g01029 Bpe-Chr11:7645356 3.67E-38 dispersed
Bpe13g00960 Bpe-Chr13:15480354 Bpe05g00659 Bpe-Chr5:20336426 1.34E-49 wgd
Bpe14g00971 Bpe-Chr14:7174468 Bpe05g00659 Bpe-Chr5:20336426 1.14E-49 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21462 PF03106 WRKY 1.60E-25 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00659 K13426 K13425 pvy:116107521 236.113