Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00661 ATGGAGGGGAAGGAAGAGGATGTCAAGCTCGGAGCGAACAAGTTTTCTGAGAGGCAACCGATTGGTACGTCTGCTCAGACGGACAAGGACTACAAGGAACCACCGCCGGCGCCGTTGTTTGAGCCCGGAGAGCTCACTTCATGGTCTTTTTACAGAGCCGGAATCGCAGAGTTTATCGCTACTTTCTTGTTCCTCTACATCTCCATTTTGACTGTCATGGGTGTAGCCAAAAGTCCTAACAAATGTGCGTCTGTGGGTACTCAAGGAATCGCCTGGGCTTTTGGTGGAATGATCTTCGCTCTCGTGTACTGCACTGCTGGAATTTCAGGAGGACACATTAACCCAGCTGTAACCTTCGGTCTCTTTCTAGCAAGAAAACTCTCTCTCACGAGAGCCATCTTCTACATAATTATGCAGTGCTTGGGCGCTATTTGCGGAGCTGGGGTTGTGAAGGGATTTGAAGGCTCAACGACGTACGAGCTGGAGCGAGGTGGGGCGAACATCGTTCAACCCGGCTACACCAAAGGAGATGGGCTCGGAGCTGAAATCGTCGGCACCTTTGTGCTTGTTTACACCGTCTTCTCAGCCACCGATGCCAAGAGAAACGCCAGGGACTCTCATGTTCCGATTTTGGCCCCGCTTCCTATCGGGTTCGCGGTGTTTTTGGTTCATTTGGCTACCATTCCCATCACCGGAACTGGTATCAACCCGGCGAGGAGTCTTGGAGCAGCAATCATCTACAACAGAGAGCACGCGTGGGATGACCAATGGATCTTTTGGGTGGGACCATTCATCGGAGCTGCTCTTGCTGCGCTGTACCACGTGATAGTGATCAGAGCCATTCCTTTCAAGACCAGAGCTTGA 864 51.85 MEGKEEDVKLGANKFSERQPIGTSAQTDKDYKEPPPAPLFEPGELTSWSFYRAGIAEFIATFLFLYISILTVMGVAKSPNKCASVGTQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFEGSTTYELERGGANIVQPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNREHAWDDQWIFWVGPFIGAALAALYHVIVIRAIPFKTRA 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 20348895 20350331 + Bpe018074.1 Bpe05g00661 104438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00661 287 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 286 IPR034294 -
Bpe05g00661 287 SUPERFAMILY Aquaporin-like 44 279 IPR023271 -
Bpe05g00661 287 MobiDBLite consensus disorder prediction 1 35 - -
Bpe05g00661 287 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe05g00661 287 PRINTS Major intrinsic protein family signature 257 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe05g00661 287 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe05g00661 287 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe05g00661 287 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe05g00661 287 PRINTS Major intrinsic protein family signature 217 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe05g00661 287 Pfam Major intrinsic protein 44 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe05g00661 287 ProSitePatterns MIP family signature. 112 120 IPR022357 -
Bpe05g00661 287 Gene3D Glycerol uptake facilitator protein. 37 285 IPR023271 -
Bpe05g00661 287 PANTHER AQUAPORIN PIP1-3 1 286 - -
Bpe05g00661 287 TIGRFAM MIP: MIP family channel proteins 56 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe05g00661 287 CDD MIP 52 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe05g00661 Bpe07g00094 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00661 Bpe-Chr5:20348895 Bpe15g01146 Bpe-Chr15:20424621 5.59E-178 dispersed
Bpe05g00661 Bpe-Chr5:20348895 Bpe07g00984 Bpe-Chr7:15573198 4.55E-25 wgd
Bpe05g00661 Bpe-Chr5:20348895 Bpe07g00094 Bpe-Chr7:682472 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00661 K09872 - dcr:108208983 543.117