Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00697 TATTCAGAAATGGAGAACTTGATCTCTTTGGTGAACAAAATTCAGAGAGCTTGCACTGCCCTGGGTGATCACGGAGAAGCTAGCGCTTTGCCGACACTTTGGGACTCTTTGCCCACGATTGCTGTTGTCGGTGGTCAGAGCTCCGGTAAGTCTTCAGTTTTAGAAAGCATCGTCGGCAAGGACTTCTTACCTCGAGGATCTGGGATTGTTACTCGTCGGCCCCTTGTTTTACAACTTCATAAACTTGACGAAGGAAGTAGAGAATATGCCGAGTTTCTTCATCTTCAAAGGAAAAGATTCACTGATTTTGGCAAATCTTATTACTATTTTGAATGTTTATGTGCAGCTGCTGTCAGAAAGGAAATTCAGGATGAGACTGATCGAGAGACTGGACGTACTAAGCAAATCTCCAGTGTTCCAATTCATCTCAGTATATATTCTCCAAATGTTGTCAACTTAACACTCATTGATCTTCCTGGTCTCACAAAAGTAGCTGTTGAAGGACAACCAGATAGTATTGTGGTTGACATTGAGAATATGGTTCGCTCCTTCATTGAGAAGCCCAATTGTATAATTCTTGCCATATCACCTGCCAATCAAGATCTTGCTACTTCAGATGCTATCAAAATCTCTCGTGAAGTTGATCCTACAGGGGAAAGGACATTTGGTGTGTTGACAAAGATCGATCTCATGGATAAGGGCACGGATGCAGTCGATATATTAGAAGGAAAATCTTATCGGCTAAAATTTCCTTGGGTTGGCGTTGTTAACCGTTCACAAGCGGATATTAACAAGAATGTTGATATGATTGCCGCTCGACGCAGAGAGCGTGAATATTTTGCAAATACTCCGGAATACAAGCACCTTTCTCACAGAATGGGTTCGGAGCATCTAGCAAAGATGCTTTCAAAGCATCTAGAAACTGTAATCAAGTCTCGTATCCCTGGCATCCAGAACCTTATTAATAAAACCATAGCTGAACTTGAAGCTGAGCTGAGCCGTCTTGGAAGGCCCATCGCCACTGATGCCGGAGGGAAACTGTATATGATCGTGGAGATTTGTCGACTTTTTGATCAGAATTACAAAGAGCATCTAGATGGAATCCGACCTGGAGGAGATAGAATCTATCACGTCTTTGATAACCAACTTCCTGCTGCTCTAAAGAGGCTGCAGTTTGACAAGCAACTTTCCATGGAAAATATTAAGAAACTCATTACTGAAGCTGATGGATATCAGCCACATCTAATAGCTCCCGAGCAAGGATACCGCCGTCTTATTGAATCTACTTTGGTCACTATCAGAGGTCCTGCTGAGTCAGCTGTTGATGCAGTTCATGTATTGTTGAAGGATTTAGTTCACAAGGCCATCAATGAGACTCCAGAGTTAAAGCAATATCCTGGTCTCAGAGTAGAGGTAGGAAATGCAGCTGTCGAGTCACTCGACAGAATGAGGGATCAAAGCAAGAAGGCAACTCTCCAACTAGTTGATATGGAATGCAGTTATCTGACTGTGGATTTCTTTCGAAAGCTTCCTCAGGATGTTGAAAAGGGTGGAAACCCCACACATTCAATTTTTGACAGATACAATGATTCGTATCTCAGACGCATTGGAACAACTGTTCTGTCATATGTAAATATGGTCTGTGCAACTTTACGTAACTCCATTCCAAAGTCCATTGTTTATTGCCAAGTGCGAGAAGCTAAACGAAGCCTGCTCGACCATTTTTTTACTGAGTTGGGTAAATTGGAGCAAAAGCGACTATCATCTCTATTGAACGAGGACCCAGCCGTAATGGAGAGGCGCACTGCCCTTGCAAAGAGGCTGGAGTTGTACAGGAGTGCACAAGCCGAAATCGACACTGTGGCTTGGTCTAAGTAG 1878 43.08 YSEMENLISLVNKIQRACTALGDHGEASALPTLWDSLPTIAVVGGQSSGKSSVLESIVGKDFLPRGSGIVTRRPLVLQLHKLDEGSREYAEFLHLQRKRFTDFGKSYYYFECLCAAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVVDIENMVRSFIEKPNCIILAISPANQDLATSDAIKISREVDPTGERTFGVLTKIDLMDKGTDAVDILEGKSYRLKFPWVGVVNRSQADINKNVDMIAARRREREYFANTPEYKHLSHRMGSEHLAKMLSKHLETVIKSRIPGIQNLINKTIAELEAELSRLGRPIATDAGGKLYMIVEICRLFDQNYKEHLDGIRPGGDRIYHVFDNQLPAALKRLQFDKQLSMENIKKLITEADGYQPHLIAPEQGYRRLIESTLVTIRGPAESAVDAVHVLLKDLVHKAINETPELKQYPGLRVEVGNAAVESLDRMRDQSKKATLQLVDMECSYLTVDFFRKLPQDVEKGGNPTHSIFDRYNDSYLRRIGTTVLSYVNMVCATLRNSIPKSIVYCQVREAKRSLLDHFFTELGKLEQKRLSSLLNEDPAVMERRTALAKRLELYRSAQAEIDTVAWSK 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 20589179 20593491 + Bpe018110.1 Bpe05g00697 104474

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00697 625 Pfam Dynamin family 40 228 IPR045063 -
Bpe05g00697 625 SMART GED_2 528 621 IPR003130 GO:0003924|GO:0005525
Bpe05g00697 625 Gene3D - 4 324 IPR027417 -
Bpe05g00697 625 PANTHER DYNAMIN-LIKE PROTEIN 1E 5 624 - -
Bpe05g00697 625 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 34 315 IPR030381 GO:0005525
Bpe05g00697 625 ProSiteProfiles GED domain profile. 533 625 IPR020850 -
Bpe05g00697 625 Gene3D Dynamin, middle domain 348 601 - -
Bpe05g00697 625 PRINTS Dynamin signature 239 258 IPR022812 -
Bpe05g00697 625 PRINTS Dynamin signature 147 164 IPR022812 -
Bpe05g00697 625 PRINTS Dynamin signature 216 232 IPR022812 -
Bpe05g00697 625 PRINTS Dynamin signature 37 55 IPR022812 -
Bpe05g00697 625 PRINTS Dynamin signature 62 79 IPR022812 -
Bpe05g00697 625 PRINTS Dynamin signature 197 215 IPR022812 -
Bpe05g00697 625 SMART dynamin_3 4 266 IPR001401 GO:0003924|GO:0005525
Bpe05g00697 625 Pfam Dynamin GTPase effector domain 529 621 IPR003130 GO:0003924|GO:0005525
Bpe05g00697 625 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 63 72 IPR019762 -
Bpe05g00697 625 CDD DLP_1 36 315 IPR001401 GO:0003924|GO:0005525
Bpe05g00697 625 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 323 IPR027417 -
Bpe05g00697 625 Pfam Dynamin central region 236 503 IPR000375 -
Bpe05g00697 625 PANTHER DYNAMIN 5 624 IPR022812 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00697 - - - twl:119981062 1122.07
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe05g00697 Bpe07g00066 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00697 Bpe-Chr5:20589179 Bpe13g00885 Bpe-Chr13:14955188 0 dispersed
Bpe08g01021 Bpe-Chr8:12474777 Bpe05g00697 Bpe-Chr5:20589179 2.78E-22 transposed
Bpe05g00697 Bpe-Chr5:20589179 Bpe07g00066 Bpe-Chr7:501488 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g146 . . Bda06g00152 Bda08g00462 Bpe05g00697 Bpe07g00066 . . . . . . . . . Cpe14g00456 . . . . . . . . Cla07g01094 . Cec07g1258 Cco07g1235 . . Cre07g1519 . . Cone6ag0857 Cone9ag0859 . . . Cme07g01570 . . . . . . Bma05g00879 Bma12g00613 . . . . . . . . . . . . . . . . . . . . . . . . Csa04g00667 Chy07g01144 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000261 5 7 3 6 5 5 6 5 5 5 4 4 4 6 5 6 4 8 5 5 5 5 5 5 5 4 4 8 5 5 154
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe05g00697 Bpe_Chr05 FPKM 22.820713 22.027452 30.020992 25.585051 18.687035 17.871811 19.815426 12.974339 12.233492 13.439635