Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00715 ATGGAAGATGAGGCGCCGATCAATCTCGAATTGGAGGTGAAATTCGTTGGGAAAAGCATCGTCAAAGCTACGAATCATTCCCCGGAACTGAAAATCCTCACTCTGTCCAACCTCGACTTGCTTTCAGGCCGCTTTCCAGTTACCTACTTCTACTTTTACCGGTGGAGACGAGTTCCAGTTGATGACTTCCGTTCAGTTATGGAGGCTCTTAAGAGTTCTCTCTCCGAAACTCTGAACCATTTCTACCCATTCGCCGGTACAATCGTTGATAATCCTGACACCGGCGAGCCTGAGATAGATTGTAACAATGGCGGCGCTCTGGTTGTAGAAGCCCTGGCCAATATACCTCTGAAGAAGTTAAACTTCTACGATCTTGATAAATCTCTCCGAGGTAAGCTGGTCGCTGTTAATGCCTCCTTTCCTCTGCAGATTCAGGTGACCGAATATACCTGCGGTGGAATTTCGTTGACGTTCACCTTTGATCATGCGCTCGGTGACGCAAGCTCCTTCGGTAAGTTTCTTCTTTCGTGGTCAGAATTAGCCCGAAAGAAGCCAATCTCCGCCGTGCCGGATCACCGAAGAATCCTACGTCCCCGGTCGCCTCCTTCCTATCATCCTTCGTTAGACGAGGCATTCGTGAAGTGCAGTATGGAAGATCTGAAGAACATTCCATTAGCAAAGCCACTGATCAAGCGACTTTATCACGTAGAAGAATCCTCCATCAGCCTTCTTCAAAAGCTTGCGTCCATCAATGGCGGGAAGAGAACGAAAATCGAGGCCTTCTCCGCCTATATTTGGAAGTTAATGGGAGCAGCTATTAATGAAAGCTATTCAAACTGCAAGATGGGGTGGCTAGTGGATGGACGTACCAGAATGGGAATCGATCAGAATTACATCGGCAACTTATTATCCGTCGCGTTTGGAGAATCCGCCATTGAAGAGCTGAACCGAAGCTCCATATCAGAAGTCGCAAGTCGTGTTAACGAGGCTATATCAAAGGTGACGAACAAGGAACATTTCTTGGATTTGATCGACTGGATAGAATGCCACAGGCCTGGACTGATGCTGTCGAGAAATGTGCTAGGGTTAGGAGGAGCGGCCATGGTCTTGTCGTCAGGGAGAAGATTTCCAGTGGCGGAGTTGGAGTTTGTATTTGGGAGGCCAGTTTTAGGAACAGTATGCTCCACCATCGAAAGCATCGGAGTAAACTACTTGAACCAGAGGCCGAGCGCTAGAGATGATGGGTCGTGGACAGTGTCCGCCATTTTATGGCCAGAGTTAGCTTCTGCTTTGGAGAAGGACTCAATCCTTCAACCCATGTCTGCAACTCTTCTTGATCTTTGA 1344 48.07 MEDEAPINLELEVKFVGKSIVKATNHSPELKILTLSNLDLLSGRFPVTYFYFYRWRRVPVDDFRSVMEALKSSLSETLNHFYPFAGTIVDNPDTGEPEIDCNNGGALVVEALANIPLKKLNFYDLDKSLRGKLVAVNASFPLQIQVTEYTCGGISLTFTFDHALGDASSFGKFLLSWSELARKKPISAVPDHRRILRPRSPPSYHPSLDEAFVKCSMEDLKNIPLAKPLIKRLYHVEESSISLLQKLASINGGKRTKIEAFSAYIWKLMGAAINESYSNCKMGWLVDGRTRMGIDQNYIGNLLSVAFGESAIEELNRSSISEVASRVNEAISKVTNKEHFLDLIDWIECHRPGLMLSRNVLGLGGAAMVLSSGRRFPVAELEFVFGRPVLGTVCSTIESIGVNYLNQRPSARDDGSWTVSAILWPELASALEKDSILQPMSATLLDL 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 20695438 20696781 - Bpe018127.2 Bpe05g00715 104492

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00715 447 Pfam Transferase family 12 434 - -
Bpe05g00715 447 Gene3D - 11 211 IPR023213 -
Bpe05g00715 447 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 34 443 - -
Bpe05g00715 447 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 34 443 - -
Bpe05g00715 447 Gene3D - 212 434 IPR023213 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00715 - - - twl:120016929 612.838
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00715 Bpe-Chr5:20695438 Bpe11g01261 Bpe-Chr11:9426047 5.40E-26 dispersed
Bpe05g00715 Bpe-Chr5:20695438 Bpe09g00456 Bpe-Chr9:12385200 1.35E-26 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g935 Blo02g01172 . . Bda08g00444 Bpe05g00715 . . . . Cmo16g00561 . . . . . Cpe14g00435 . . . . . . . . . . . . . . . . . Cone6ag0881 . . . . . . . . . . . Bma05g00897 . . . . . Cma16g00514 . . . . . . . . . . . . . . . . . . . Csa04g00704 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009990 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 2 1 1 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe05g00715 Bpe_Chr05 FPKM 16.707605 19.240421 24.722631 26.819706 33.001381 29.594547 32.110188 28.472069 26.653017 33.666737