Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00733 ATGGATCGCCCGATCGACAATGATATTCAGATTGAGGGATTTGATAGGAATGGTTCTGGAGTTTCGGAGGATAAAGACTCTGTCATGCTCAAGATGAAGGAACCTCTCCTTACTAAAGCTAACAGGATCAATACTACCTCTCAACTTGCCATTGTTGGCTCCAATGTTTGCCCCATCGAAAGCCTCGACTACGAGATCGCTGAGAATGATCTTTTCAAGCAGGACTGGAGATCCAGAACAAAGACAGAGATTTTTCAATATGTTGTCCTCAAATGGACCCTTGCCCTGCTGATTGGTGTAGGCACTGGCCTTGTTGGCTTCTTCAATAACCTTGCTGTTGAAAACATAGCTGGGTTCAAACTTCTACTCAGTAACAACCTCATGCTTCAGAACAAGTTTTTTCAAGCATTTGTAGCCCTTGCTAGTTGCAACATGGTTTTGGCCATAGCTGCTTCAGCACTTTGTGCCTACATTGCTCCTGCAGCTGCTGGCTCTGGCATACCAGAAGTAAAAGCATACCTGAACGGAGTAGATGCTCATTCCATTTTGGCTCCGGCTACACTGTTTGTAAAGATTTTTGGTTCCATATTTGGTGTTGCTGCTGGATTTGTTGTGGGTAAGGAAGGACCTATGGTACACACTGGTGCATGCATTGCCAATTTACTTGGACAAGGAGGCTCACGCAAATATCACTTAACTTGGAAGTGGCTCAGGTACTTCAAAAATGATAGGGACAGGCGAGATCTGATCACCTGCGGTGCTGCTGCTGGAGTAGCTGCTGCCTTCCGTGCCCCAGTTGGTGGAGTTCTCTTCGCACTTGAAGAAGCAGCTTCATGGTGGAGGAGTGCTCTTCTTTGGAGAACCTTCTTTACCACTGCCGTAGTAGCAGTTGTGTTGAGAGGTTTCATCGTGTTTTGCCGGGGTGGAAAATGTGGACTTTTTGGTGAAGGAGGTCTTATTATGTTTGACGTCAATTCAGAACAAGTTTCTTACAGCACCCCCGATTTACTGGCGGTGATATTCCTTGGCGTTCTTGGTGGTGTCTTTGGAAGTCTTTACAATTATTTCGTTGACAAGGTTCTCCGCACTTATAGCATCATCAACGAGAAAGGTCCTTCCATGAAAATTCTACTTGTCGTTGCCATTTCTCTAATGACTTCTTGTTGCTTTTATGGACTTCCATGGTTCTCCATGTGCATTCCTTGCCCTGCTCACTTGGAGGATCAGTGTCCGACTGTAGGTCGCACCGGTAACTACAAGAACTTTCAGTGTCCTCCTAACCATTACAATGACCTTGCTTCCCTCTTACTCAACACAAACGATGATGCAATTCGCAACCTGTTGAGCCCTGGTTCCAATAAGGAGTTTCACTTCTCTACTCTTGTAGTTTTCTTTGCTGCCATCTACCTTCTCGGAATTATCACTTACGGAATAGCTATTCCCTCTGGCCTTTTCATTCCTGTAATACTTGCCGGAGCATCTTACGGCCGCCTTGTGGGGACACTCGTTGTCTCTCTATCAAATCTTGATGTGGGTCTCTTTGCTCTCCTCGGAGCTGCTTCTTTTCTTGGCGGGACCATGAGAATGACTGTTTCTCTCTGTGTCATCCTTCTTGAACTTACCAATGATCTATTGATGCTACCATTGGTTATGCTTGTTCTTCTGATTTCAAAAACTGTGGCAGACTGTTTCAACAAAGGTGTCTATGATCAAATTGTCAAAATGAAGGGGCTGCCATACTTGGAAGCTCATGCAGAGCCATATATGAGACACTTGGTCGCAAGTGATGTTGTGTCTGGCCCGCTGATTACATTCTCCGGAGTGGAAAAAGTTGGAACCATAATGTATGCTTTGAAGATGACAAACCATAATGGATTCCCTGTTATCGACGAGCCTCCATTCACAGAAGCTCCTGAGCTGTGCGGGCTTGTTCTGAAGTCTCATCTTCTTGTTTTGCTTAAAGGGAAGAAATTCACAAAGCAGAAAGTGAGTACTGGATCGGCAATCATTCGGAGTTTCAAAGCTCATGAGTTTGCTAAAGCGGGATCGGGTAAGGGAGTGAAGCTGGAGGACTTGGATATCAAAGATGATGAGATGGAGATGTATGTAGATCTTCATCCTATTACTAACACATCCCCCTACACTGTAGTGGAAACAGTGTCTCTCGCTAAAGCGGCTATTCTCTTCCGGGAACTTGGCCTTCGCCACTTGATGGTCGTCCCAAAGACACCAGGGGAGGACTCGGTTTCCAAGTTGAAACCTAGTAAGTTATCACTCTCAGTCGTCTCTTCAATCTCAGAAGTTTCAGCCAGTGCGTGGGATGCATGCACCATGGATGCTACAGGCCCTGAAAAATTTAACCCATTTCTCACTCATGGTTTTCTCTCAAGTCTGGAGGAGACGGGCTGTGCAGTTAAGGAAACTGGATGGAGTCCACAACACATTGTTGCAAAGGATGAATTTGAAAACATAGTAGCTGTTGTCCCCCTGTATCTTAAAAGTCATTCCTACGGGGAATTTGTTTTTGATCATTCTTGGGCTGATGCATACTACAGTTTTGGTACGAGATATTACCCAAAATTACAATGTTGTGTGCCTTTTACTCCCGTAACAGGCCCGAGGATTTTAGTTCGTAATACTTCTTTCAAGGATCAAGTTTTTGACATTGTAGTTTCTGCTATGAGAGACATGGTAGACAAGTCTCAGCTTTCATCCCTCCACATTACCTTCCCATCTGAAAGTGAGTGGTCCAAACTTAGCGAAAAGGGATTTCTTCAGAGAATTGGTATGCAATATCACTGGAAAAATCGCAACTATAAAAGTTTTGATGAGTTTTTGATGGATATGAAGCAAAGTAAAAGGAAAAATATTCGTCAAGAGCGCAAAAAGATTCTCTCTCAAAACTTAACAATGAAGCGGCTTTGTGGCCATGAAATAAAGACTAAGCATTGGGATTCATTCTATCAGTTCTACAGAAACACGACCGATAACAAGTGGGGTACTCCTTATCTTACGAGAGATTTCTTTCACGAAATGGCATCGAAGATGGGAGATAAGGTGATTCTAGTTGTTGCAATAGAAGGAGATGAACTTGTTGCTGGAGCGCTTAATCTCATAGGAGGTGATACCTTATATGGACGCCTATGGGGTTGTGACCCACGAGCTTACTATCCAAGTTTGCATTTTGAAGCCTGCTATTATCAGGCAATTGAAGCAGCTATAGACCTTAATATCAAGACAGTCGAGGCAGGAGCTCAAGGGGAGCACAAAATTCAGCGAGGCTATCTTCCAGTGATGACGTATAGCTCTCATTACCTTACAGACAAAGGTTTTGGGAAAGCCATACAGGATTTCCTTGTGCGAGAGTCGACACAGATAAAACTTGTTATGAAGCTGTTACATGATTCTAGTCCTTTCAAAGATGATTTGTAG 3432 43.94 MDRPIDNDIQIEGFDRNGSGVSEDKDSVMLKMKEPLLTKANRINTTSQLAIVGSNVCPIESLDYEIAENDLFKQDWRSRTKTEIFQYVVLKWTLALLIGVGTGLVGFFNNLAVENIAGFKLLLSNNLMLQNKFFQAFVALASCNMVLAIAASALCAYIAPAAAGSGIPEVKAYLNGVDAHSILAPATLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSRKYHLTWKWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFIVFCRGGKCGLFGEGGLIMFDVNSEQVSYSTPDLLAVIFLGVLGGVFGSLYNYFVDKVLRTYSIINEKGPSMKILLVVAISLMTSCCFYGLPWFSMCIPCPAHLEDQCPTVGRTGNYKNFQCPPNHYNDLASLLLNTNDDAIRNLLSPGSNKEFHFSTLVVFFAAIYLLGIITYGIAIPSGLFIPVILAGASYGRLVGTLVVSLSNLDVGLFALLGAASFLGGTMRMTVSLCVILLELTNDLLMLPLVMLVLLISKTVADCFNKGVYDQIVKMKGLPYLEAHAEPYMRHLVASDVVSGPLITFSGVEKVGTIMYALKMTNHNGFPVIDEPPFTEAPELCGLVLKSHLLVLLKGKKFTKQKVSTGSAIIRSFKAHEFAKAGSGKGVKLEDLDIKDDEMEMYVDLHPITNTSPYTVVETVSLAKAAILFRELGLRHLMVVPKTPGEDSVSKLKPSKLSLSVVSSISEVSASAWDACTMDATGPEKFNPFLTHGFLSSLEETGCAVKETGWSPQHIVAKDEFENIVAVVPLYLKSHSYGEFVFDHSWADAYYSFGTRYYPKLQCCVPFTPVTGPRILVRNTSFKDQVFDIVVSAMRDMVDKSQLSSLHITFPSESEWSKLSEKGFLQRIGMQYHWKNRNYKSFDEFLMDMKQSKRKNIRQERKKILSQNLTMKRLCGHEIKTKHWDSFYQFYRNTTDNKWGTPYLTRDFFHEMASKMGDKVILVVAIEGDELVAGALNLIGGDTLYGRLWGCDPRAYYPSLHFEACYYQAIEAAIDLNIKTVEAGAQGEHKIQRGYLPVMTYSSHYLTDKGFGKAIQDFLVRESTQIKLVMKLLHDSSPFKDDL 1143
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 20807724 20821019 - Bpe018146.2 Bpe05g00733 104510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00733 1143 Gene3D - 938 1095 - -
Bpe05g00733 1143 PRINTS Chloride channel signature 160 177 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe05g00733 1143 PRINTS Chloride channel signature 191 210 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe05g00733 1143 PRINTS Chloride channel signature 512 528 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe05g00733 1143 PRINTS Chloride channel signature 530 549 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe05g00733 1143 PRINTS Chloride channel signature 255 274 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe05g00733 1143 PRINTS Chloride channel signature 480 500 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe05g00733 1143 PRINTS Chloride channel signature 568 582 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe05g00733 1143 PRINTS Plant CLC chloride channel signature 276 284 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bpe05g00733 1143 PRINTS Plant CLC chloride channel signature 65 73 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bpe05g00733 1143 PRINTS Plant CLC chloride channel signature 290 300 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bpe05g00733 1143 PRINTS Plant CLC chloride channel signature 432 448 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bpe05g00733 1143 PRINTS Plant CLC chloride channel signature 308 315 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bpe05g00733 1143 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 28 749 - -
Bpe05g00733 1143 CDD CBS_pair_voltage-gated_CLC_euk_bac 594 742 - -
Bpe05g00733 1143 Pfam Peptidogalycan biosysnthesis/recognition 764 1140 IPR007434 -
Bpe05g00733 1143 Gene3D Clc chloride channel 83 582 - -
Bpe05g00733 1143 SUPERFAMILY CBS-domain pair 585 742 IPR046342 -
Bpe05g00733 1143 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 941 1115 IPR016181 -
Bpe05g00733 1143 Pfam Voltage gated chloride channel 148 562 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe05g00733 1143 CDD ClC_6_like 60 581 - -
Bpe05g00733 1143 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 28 749 - -
Bpe05g00733 1143 SUPERFAMILY Clc chloride channel 69 584 IPR014743 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g00839 Bpe05g00733 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02140 Bpe-Chr2:22738391 Bpe05g00733 Bpe-Chr5:20807724 0 transposed
Bpe04g00839 Bpe-Chr4:5516404 Bpe05g00733 Bpe-Chr5:20807724 0 transposed
Bpe11g01498 Bpe-Chr11:11105088 Bpe05g00733 Bpe-Chr5:20807724 0 transposed
Bpe13g01153 Bpe-Chr13:16981922 Bpe05g00733 Bpe-Chr5:20807724 0 transposed
Bpe05g00733 Bpe-Chr5:20807724 Bpe07g00038 Bpe-Chr7:328195 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00733 K05016 - jre:108988922 1184.86