Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00746 GCCCGTGTAGATGGATATGATGCGTTGGATCCGCATGGCAATATAACTATCACGTGGGATTTCATGCTACAAAACGAAGAAACATACGATGTGAAAGTCTACATATACAACCTGCAACTATTCAGGAATGTAGAGCCGCCGGGATGGAAGCTCAACTGGGAATGGAAAGGAAAAGAGGTGATTTGGAATATGAGGGGAGCTGAGGCCAGTCAGCAAGGAGACTGCTCCGAATACAGAGGGAGGCAAGAGCTGCCCCATTGTTGCCTGAGGAAACCTGCCGTCGTCGATTTAATGCCAGGAGCGCCCTTCAATCTTCAGGTTTCCAACTGCTGCAAAGCTGGGGTGCTATCTTCAATGGCGCAAGATCCTTCCAGCTATGCTTCCGCCTTCCAGATGACAATCGAAATGCCTGCGGGAGGTACATTTACGATGCCTGAGAATTTCAGTTTGGATCTTCCTGGGTATAGCTGCGGATCTCCTTTTCGGGTCTCTCCGAGTAAGTTCAGCGCCGACGGGGGCCGCCGGTGGACTCAAGCTCTGGAGACCTGGAATGTGACCTGTATTTACTCACAATTCAGAGCATCATCTTCCCCAAAGTGCTGCGTCTCACTCTCTGCGTTTTACAACTCCACCATTCTTCCCTGTCCTCCCTGCAGCTGCGCCTGCCAAGGACAAACTAACGAAAAACTCCATTGCAGAGCAGATGAAGCTCCTCCACTCGTGCAACTTCCACACAAAAATTCAAGTTTAGTGAGGTGTTCCCACCATATGTGCCCAGTAAGAGTCCATTGGCATATAAAAGAAAGTTACAAAGAATATTGGAGAGTGAAGATGACCATCACCAACCTTAATATCCTCAAGAATTACTCCATGTGGAACTTGGTGGTGCTTCACCCAAATTTGCAGAGCTTGACCCAAGTTTTCAGCTTCAATTACCGCCCTCTTATTCAGTACGGCGACATCAACGATACAGGCATGTTTTGGGGTATTCGATACTACAACGACCTGTTACTCGCCTATGGAGGAGATGGGAATGTTCAGACGGAGATGCTGCTGCACAAAGATGCCGGAATTTTCACTTTCCGAGAAGGCTGGGCTTTTCCGAGGAAAATTATATTCAACGGAGATGAATGCGTGATGCCTCCTCCAGACCAGTACCCCCGGCTGCCCAATCAAGCTCCTACCCATGCAGCTTCCACTTCTTTCCTTTCTACATTTATCGTTTCACTTTTTCTAACCATAACTCTTCATTAA 1254 48.01 ARVDGYDALDPHGNITITWDFMLQNEETYDVKVYIYNLQLFRNVEPPGWKLNWEWKGKEVIWNMRGAEASQQGDCSEYRGRQELPHCCLRKPAVVDLMPGAPFNLQVSNCCKAGVLSSMAQDPSSYASAFQMTIEMPAGGTFTMPENFSLDLPGYSCGSPFRVSPSKFSADGGRRWTQALETWNVTCIYSQFRASSSPKCCVSLSAFYNSTILPCPPCSCACQGQTNEKLHCRADEAPPLVQLPHKNSSLVRCSHHMCPVRVHWHIKESYKEYWRVKMTITNLNILKNYSMWNLVVLHPNLQSLTQVFSFNYRPLIQYGDINDTGMFWGIRYYNDLLLAYGGDGNVQTEMLLHKDAGIFTFREGWAFPRKIIFNGDECVMPPPDQYPRLPNQAPTHAASTSFLSTFIVSLFLTITLH 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 20891832 20893413 + Bpe018160.1 Bpe05g00746 104523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00746 417 PANTHER COBRA-LIKE PROTEIN 6 4 410 - -
Bpe05g00746 417 Pfam COBRA-like protein 29 190 IPR006918 GO:0010215|GO:0031225
Bpe05g00746 417 PANTHER PROTEIN COBRA 4 410 IPR006918 GO:0010215|GO:0031225
Bpe05g00746 417 PIRSF COBRA 1 417 IPR006918 GO:0010215|GO:0031225
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01104 Bpe05g00746 CCT
Bpe04g01104 Bpe05g00746 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00746 Bpe-Chr5:20891832 Bpe11g00048 Bpe-Chr11:347099 4.96E-162 dispersed
Bpe05g00746 Bpe-Chr5:20891832 Bpe07g00746 Bpe-Chr7:13997688 2.12E-164 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00746 - - cmo:103496092 609.372