Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00757 CTCTCACCTCCGCTGATGGCTTCCAACGTTCTCTTCCTTCTACTCATTTTTACCCTCATTCTATCCCCCTCCTCAGCTCAGACCTCTTTCCGACCCAAAGCTCTCGTTCTTCCGGTGACGAAAGACGCGTCCACGCTTCAGTATCTGACTACTTTCAACCAGAGAACGCCCCTCGTCCCTCTGAAACTGACGGTGGATCTCGGAGGGCAGTTTCTATGGGTCGATTGCGTTACGGGCTATGTTTCTTCAACCTACAGACCAGCTCGTTGTCGGTCTGCCCAGTGCTCTTTGGCCAAAGCCACTGCCTGTGGAGAATGTACGGAAGGACCCAAACCAGGTTGTAATACCAATACCTGCAATCTCTTCCCCGACAATCAAGTCATCAAACTGTCGACGATCGGCGAAGTTGCTCAGGACGTTGTCTCTCTCCGGTCGACGGACGGATTCAATCCCGGTAGAGTCGTGTCGGTGCCCAATTTCATCTTCACCTGCGGAGCTCCTTTGCTCTTGGAAGGTCTCGCTAAAGGAGTCGTCGGGATGGCTGGCTTCGGAAGAACTAAAATCTCACTTCCGTCTATGTTCTCAGCTGCTTTCAGCTTCGACAGAAAATTCGCCTTTTGCTTAAGCTCTACCACCTCCTCCAATGGCGTAATTTTCTTCGGAGATGGTCCCTATGTTCTGCTTCCGAACATCGACGTCTCAAAATCCCTGAGTTACACACGGCTCGTCATCAATCCGGTGAGCACCGCGGGAGTCTACTCAGAAGGTGACAAATCGGTGGAGTATTTCATCGAAGTGAAATCCATTAAAATAAACAACAAGGTCGTCCCCCTCAATACAACTCTGCTATCTTTCGACAAAGAGGGCGTCGGAGGAACGAAGATAAGCACGGTGGATCCATACACGGTGATGGAAACCTCGATCTACAGAGCCGTCGTCGACACTTTCGTCAGGCAGCTCTCGAGGGTACCGAGAGTTCCATCGATTCGTCCGTTCGGAGCGTGCTTCGACTCCAGAAACCTGGGCAGCACCAGGGTCGGACCGCCAGTGCCGCAGATAGACCTGGTTCTGAAGAACAACAAAGTATGGTCCATCTTCGGAGCGAATTCGATGGTGCAGGTGAGAGAAAACGTGGTGTGCCTGGGAATCGTGGACGGCGGTGCGCAGCCGAGAACGGCGATCGTGATAGGCGGACACCAGTTGGAAGACAATCTTCTGCAGTTCGATTTGGCAACGTCGAGGCTTGGATTTAGCTCGTCGTTGCTGTTCTACCGGACGACATGCAGTAACTTTAATTTCACGGCGAAAGCTTAA 1314 52.05 LSPPLMASNVLFLLLIFTLILSPSSAQTSFRPKALVLPVTKDASTLQYLTTFNQRTPLVPLKLTVDLGGQFLWVDCVTGYVSSTYRPARCRSAQCSLAKATACGECTEGPKPGCNTNTCNLFPDNQVIKLSTIGEVAQDVVSLRSTDGFNPGRVVSVPNFIFTCGAPLLLEGLAKGVVGMAGFGRTKISLPSMFSAAFSFDRKFAFCLSSTTSSNGVIFFGDGPYVLLPNIDVSKSLSYTRLVINPVSTAGVYSEGDKSVEYFIEVKSIKINNKVVPLNTTLLSFDKEGVGGTKISTVDPYTVMETSIYRAVVDTFVRQLSRVPRVPSIRPFGACFDSRNLGSTRVGPPVPQIDLVLKNNKVWSIFGANSMVQVRENVVCLGIVDGGAQPRTAIVIGGHQLEDNLLQFDLATSRLGFSSSLLFYRTTCSNFNFTAKA 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 20958042 20959355 + Bpe018171.1 Bpe05g00757 104534

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00757 437 Pfam Xylanase inhibitor C-terminal 261 418 IPR032799 -
Bpe05g00757 437 Pfam Xylanase inhibitor N-terminal 48 222 IPR032861 -
Bpe05g00757 437 ProSiteProfiles Peptidase family A1 domain profile. 48 418 IPR033121 -
Bpe05g00757 437 PANTHER ASPARTYL PROTEASE-RELATED 10 436 IPR001461 GO:0004190|GO:0006508
Bpe05g00757 437 Gene3D Acid Proteases 27 221 IPR021109 -
Bpe05g00757 437 SUPERFAMILY Acid proteases 39 427 IPR021109 -
Bpe05g00757 437 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 10 436 - -
Bpe05g00757 437 Gene3D Acid Proteases 223 435 IPR021109 -
Bpe05g00757 437 CDD xylanase_inhibitor_I_like 53 421 IPR033868 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00757 - - - jre:109010481 631.328
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00757 Bpe-Chr5:20958042 Bpe06g00477 Bpe-Chr6:16060314 0 dispersed
Bpe05g00756 Bpe-Chr5:20953473 Bpe05g00757 Bpe-Chr5:20958042 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g436 . . . Bda08g00394 . . . Bma05g00939 . . . . . . . Cpe08g00244 . . . . . . . . . . . . . . . . . . . . . . Cme06g00641 . . . . Bpe05g00757 . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa03g01367 Chy06g00610 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002462 3 1 0 5 3 2 2 2 1 3 1 2 2 3 3 2 2 4 2 2 3 1 1 1 1 1 2 2 1 3 61
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe05g00757 Bpe_Chr05 FPKM 6.22695 5.346439 221.825378 201.492142 774.613464 745.446838 703.545715 44.516777 45.946308 40.381725