Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00769 ATGGGATCATGCCTCTCTGAAGATGGTGTCTCTGCCACTCGCGCCGTTCATTACTCTCCGGTGGCTTCTACGTCTCAGGAACAGGCCCTTCTTCGGCGGAGGAATTCTAGGAGAAAGATGAGCAGAAGGGATTCCACCTCCTACACCTCTTCGGATGCGGAGATGCGGCTTCATCGTATACCTGGCAGGATGTTTTTGAGTGGCTCTTCCAATTCTGCTTCCCTCTTCACCAAGCAAGGCAGAAAAGGTGTTAATCAGGATTCGATGATTGTTTGGGAGAATTTTGGCTCAAAAGAAGACGCAATATTTTGTGGTGTCTTTGATGGCCATGGGCCTTATGGTCATTTGGTTGCAAAGAAAGTGAGAGATTCTCTTCCTTCAAAGCTAAGTGCCCAGTGGGAATTAGATGTTACGTATAAGAGCAATCAGGATGAAGTATTTATGACATTGAAGGAGTCATTCTTGAAGGCTTTTAAAGTAATGGACAAGGAACTCAAGCTGCATCCTCATATTGATTGCTTTTACAGTGGGACAACAGCAGCTACACTGGTCAAGCAGGGACAAGACCTTATTATAGGAAATGTAGGGGACTCGAGAGCTATACTAGGCACAAGGGATGACAATGACTCTCTAATTGCTATGCAGTTGACCGTAGATCTCAAGCCAAATCTTTCAAGAGAAGCTGAAAGGATAAAGAATTGTCATGGACGAGTGTTTGCTCTACCAATTGAACCTGATGTTGCTCGAGTTTGGATGCCCAACCGTGACTCCCCTGGTCTTGCCATGGCTAGGGCATTTGGAGACTTCTGCTTAAAAGACTTTGGCTTGATCTCTGTCCCAGACATTTTTCATCATCGAATCACAGAGAGGGATGAGTTTGTTGTACTGGCTACAGATGGGGTATGGGATGTTCTTTCGAATGAAGAAGTGGTGTACATAGTTGGAACTGCGTCAAAATCTTCTGCAGCTCGAGCTATTGTGGAGTCGGCAACTCGAGCTTGGAGATACAAGCACCCTTCTTCTAAAATTGATGATTGTGCTGTGGTTTGCCTCTTCCTCCACTCAACAAATACAAGCAGCAGCAGTTATTCAAAACCTAAACCTCCCATTCCAGACGCATAA 1122 45.28 MGSCLSEDGVSATRAVHYSPVASTSQEQALLRRRNSRRKMSRRDSTSYTSSDAEMRLHRIPGRMFLSGSSNSASLFTKQGRKGVNQDSMIVWENFGSKEDAIFCGVFDGHGPYGHLVAKKVRDSLPSKLSAQWELDVTYKSNQDEVFMTLKESFLKAFKVMDKELKLHPHIDCFYSGTTAATLVKQGQDLIIGNVGDSRAILGTRDDNDSLIAMQLTVDLKPNLSREAERIKNCHGRVFALPIEPDVARVWMPNRDSPGLAMARAFGDFCLKDFGLISVPDIFHHRITERDEFVVLATDGVWDVLSNEEVVYIVGTASKSSAARAIVESATRAWRYKHPSSKIDDCAVVCLFLHSTNTSSSSYSKPKPPIPDA 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21055939 21059984 + Bpe018181.1 Bpe05g00769 104546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00769 373 CDD PP2Cc 71 353 IPR001932 -
Bpe05g00769 373 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 140 364 - -
Bpe05g00769 373 MobiDBLite consensus disorder prediction 16 53 - -
Bpe05g00769 373 ProSiteProfiles PPM-type phosphatase domain profile. 72 353 IPR001932 -
Bpe05g00769 373 SMART PP2C_4 64 351 IPR001932 -
Bpe05g00769 373 Pfam Protein phosphatase 2C 78 330 IPR001932 -
Bpe05g00769 373 PANTHER ALPHABET, ISOFORM E-RELATED 1 135 - -
Bpe05g00769 373 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 135 - -
Bpe05g00769 373 Gene3D - 66 356 IPR036457 -
Bpe05g00769 373 SUPERFAMILY PP2C-like 66 355 IPR036457 -
Bpe05g00769 373 PANTHER ALPHABET, ISOFORM E-RELATED 140 364 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00479 Bpe-Chr2:3107595 Bpe05g00769 Bpe-Chr5:21055939 3.33E-103 dispersed
Bpe04g01212 Bpe-Chr4:16522169 Bpe05g00769 Bpe-Chr5:21055939 0 dispersed
Bpe05g00769 Bpe-Chr5:21055939 Bpe11g01273 Bpe-Chr11:9532508 5.22E-162 dispersed
Bpe05g00769 Bpe-Chr5:21055939 Bpe09g00681 Bpe-Chr9:15406769 5.07E-167 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00769 - - nnu:104590775 477.633