Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00780 GATAACAGAAGCAGCCATCTCCAATTCAACAACATGCCCGTTTCTGCCATTGTTGACCCTCGAGTTTTTTCGCATTCTCTGGCCAAATCCTCTATTTTCAGCTCTCCTGGACTCTCTCTCTCGCTTCAAACTAATTTGGAGGCGTCACCCAGAATGGCTGAAGCTTTCGAGCATAACCTTGGGAGAAGTAGAGAGGAATTCGAGCATGAAAGCAGATCCGGCAGTGATAACATGGATGGCGCCTCCGGCGACGAACAAGTTGCCACCGGCGACAAGCCACCGAGAAAGAAACGATACCACCGACACACTCCTCAACAAATCCAAGAACTCGAACTAGTTTTTAAGGAGTGCCCTCATCCCGATGAGAAGCAAAGATTAGAGCTTAGCCGGAGGCTATGTCTGGAAACCAGACAAGTTAAATTCTGGTTCCAAAATCGTCGAACCCAGATGAAGACTCAGTTGGAAAGGCACGAGAATACGCTGTTGAGGCAAGAAAACGACAAGCTCCGATCGGAGAACTTGTCTATCAGAGAGGCGATGAGGAACCCAATTTGCACCAACTGTGGTGGTCATGCGATGATTACTGAAATATCACTTGAAGAACAGCAACTGAGGATCGAAAACGCCCGATTGAAAGACGAGTTAGACCGTGTTTTCCTCCTCGCCGGAAAGTTTCTCGGTCGACCTGTTGCTACTCCACTTTCAGGCTCAAATTTAGAGCTTGGGGTCGGAATGAACGGCTTTGGTGGCCTCCCTCTGCCTGCATCCATGACTCTTCCGCCGGAATTTACCATCGGAATTGCCGACAGTTCACATAGTTCTGTGGGGAGGTCCATGTTTCTAGAGCTAGCGTTGGGCGCCATGGATGAACTGGTGAAAATAGCGCAGATAGACGACCCTCTTTGGACCAGAAATTCAAAAATGGGAAGAGAAATTCTGAACCAGGAGGAGTATATGAAAATATTGTCTCCTTGCATTGGTTTAAAATCAAATGGTTTTGCAAGGGAGGCTTCGAGAGAGACCGGCATCGTTATGATTAACACCATTGCTCTCGTCGAAACGCTGATGGATTCGAAACATTTGGCGGAGATGTTTCCTTGTTTGATTGCTAGAACGAGCACGACGGATGTGATATCGAGCGGAGAGGGAAGAACACGAAATGGTGCATTGCAACTGATGCATGCTGAATTTCAAGTGCTATCTCCATTGGTTCCGATTCGATCTGTTAGTTTCCTTCGCTTTTGCAAACAGCACGCCGAAGGAGTCTGGGCCATTGTCGATGTCTCCGTCGACACCATGAAAGAAGCTAACTCTAGGAGGCTTCCTTCTGGATGTGTTATCCAAGATATGCTAAATGGGTGCTCCAAGGTGACGTGGGTGGAGCATGCCGAGTACGACGAAAGCCAAGTCCACCACCTCTACCGGCCCTTACTAAGCTCCGGCATCGGCTTTGGAGCTCGGCGATGGGTTGCCACTCTCCAACGCCAATGCCAATGTCTCGCCATCCTCGCGTCTTCCTCCCTTCAGCCTCCCAACCACACTGGTATGAATTTTGATGCAGCCATAACTCCGGCCGGTCACAGGAGCATGTTGAAGTTGGCCGGGAGGATGACCGAAAACTTCTGTGCTGGAGTGTGCGGATCGACGGTGCATGAATGGAACAAGCTTAACGCCGGAAATGTGGATGAGAACGTCCGGGTGATGACCCGACAGAGCATCAACGATCCCGGGGAGCCTTCTGGAATCGTGCTGAGCGCCGCCACGTCGGTTTGGCTTCCGGTTTCCCCGGAGCGGTTGTTCGACTTTCTTCGCGATGAACGGCTGAGGAGCGAATGGGACATTCTATCCAACGGCGGACCCATGCAGGAGATGACCCGCATTGCCAAAGGCCAAGACCGTCGCAACTGCGTCTCTCTCCTCCAAGCCAGCGCTACGAATGCCAATCAGAGAAGTATGCTAATACTTCAGGAAACATACATGGACGTTGCCGGATCATTAGTTGTGTACGCCCCGGTCGACGTTCCTGCAATGCAAATTGTGATGAATGGTGGCGATTCAACCTATGTGGCATTATTGCCATCAGGATTCTCTGTAGTACCGGATGGACGAGAGTTGATTGGCTCCGTCGAAACAATCATCGACGGTAAATCTGGACAAGGCGAGGATGACCCAAGACTATTCAACGGTGGTGGGTGTCTCCTCACTGTAGCCTTTCAAATCCTATTGAACAACCTCCCAACGGCCAAGCTCACGGTAGAGTCCGTGGAGACGGTCAACAATCTCATCTCCTGCACCGTACAGAAGATCAAGGTTGCCCTTCAATGCAACAATTAA 2334 50.34 DNRSSHLQFNNMPVSAIVDPRVFSHSLAKSSIFSSPGLSLSLQTNLEASPRMAEAFEHNLGRSREEFEHESRSGSDNMDGASGDEQVATGDKPPRKKRYHRHTPQQIQELELVFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRSENLSIREAMRNPICTNCGGHAMITEISLEEQQLRIENARLKDELDRVFLLAGKFLGRPVATPLSGSNLELGVGMNGFGGLPLPASMTLPPEFTIGIADSSHSSVGRSMFLELALGAMDELVKIAQIDDPLWTRNSKMGREILNQEEYMKILSPCIGLKSNGFAREASRETGIVMINTIALVETLMDSKHLAEMFPCLIARTSTTDVISSGEGRTRNGALQLMHAEFQVLSPLVPIRSVSFLRFCKQHAEGVWAIVDVSVDTMKEANSRRLPSGCVIQDMLNGCSKVTWVEHAEYDESQVHHLYRPLLSSGIGFGARRWVATLQRQCQCLAILASSSLQPPNHTGMNFDAAITPAGHRSMLKLAGRMTENFCAGVCGSTVHEWNKLNAGNVDENVRVMTRQSINDPGEPSGIVLSAATSVWLPVSPERLFDFLRDERLRSEWDILSNGGPMQEMTRIAKGQDRRNCVSLLQASATNANQRSMLILQETYMDVAGSLVVYAPVDVPAMQIVMNGGDSTYVALLPSGFSVVPDGRELIGSVETIIDGKSGQGEDDPRLFNGGGCLLTVAFQILLNNLPTAKLTVESVETVNNLISCTVQKIKVALQCNN 777
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21118981 21123562 + Bpe018191.1 Bpe05g00780 104557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00780 777 CDD homeodomain 95 153 IPR001356 GO:0003677
Bpe05g00780 777 Coils Coil 194 214 - -
Bpe05g00780 777 SUPERFAMILY Homeodomain-like 81 153 IPR009057 -
Bpe05g00780 777 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 44 775 IPR042160 -
Bpe05g00780 777 Coils Coil 147 182 - -
Bpe05g00780 777 Gene3D - 83 169 - -
Bpe05g00780 777 SMART HOX_1 94 157 IPR001356 GO:0003677
Bpe05g00780 777 ProSitePatterns 'Homeobox' domain signature. 128 151 IPR017970 GO:0000981|GO:0006355
Bpe05g00780 777 Pfam START domain 283 499 IPR002913 GO:0008289
Bpe05g00780 777 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 44 775 - -
Bpe05g00780 777 Pfam Homeodomain 96 151 IPR001356 GO:0003677
Bpe05g00780 777 SUPERFAMILY Bet v1-like 539 768 - -
Bpe05g00780 777 CDD START_ArGLABRA2_like 277 498 - -
Bpe05g00780 777 ProSiteProfiles START domain profile. 273 502 IPR002913 GO:0008289
Bpe05g00780 777 MobiDBLite consensus disorder prediction 62 103 - -
Bpe05g00780 777 SMART START_1 282 499 IPR002913 GO:0008289
Bpe05g00780 777 ProSiteProfiles 'Homeobox' domain profile. 93 153 IPR001356 GO:0003677
Bpe05g00780 777 SUPERFAMILY Bet v1-like 276 499 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00780 Bpe-Chr5:21118981 Bpe14g00705 Bpe-Chr14:5506370 0 dispersed
Bpe03g00296 Bpe-Chr3:4039526 Bpe05g00780 Bpe-Chr5:21118981 0 transposed
Bpe03g00637 Bpe-Chr3:26570019 Bpe05g00780 Bpe-Chr5:21118981 0 transposed
Bpe13g00904 Bpe-Chr13:15072210 Bpe05g00780 Bpe-Chr5:21118981 3.35E-32 transposed
Bpe14g00999 Bpe-Chr14:7375836 Bpe05g00780 Bpe-Chr5:21118981 0 transposed
Bpe04g01164 Bpe-Chr4:12505762 Bpe05g00780 Bpe-Chr5:21118981 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21473 PF01852 START 9.10E-45 CL0209 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00780 K09338 - csv:101222248 1100.12