Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00790 TATATGCTTGCCTTCTGTGTAAGTTTCTGTTCTTATAGAGAATCCAGCATTGCTATGGCGGCAGCCAATTTTCTCAGGTATCCCGTTCTGATGGGAGCTGTTTCCCATCCGTATAGCAAGAAAAAGATGGCGCAGGTTTGCCATTGTAGCCTCAATTCTAAGGCTGGCGATGTTTTTTCTGTGACTTCGTCGAGTAAGTGCGATGTCGACTATTTAGGGCAGAGTACGAAAGGGGATTTGAACCTCAAATTAGAGCATCTCGAAGCTTTCGGAACTGATAGTGAAGGAAGCTTTCATGGCCCCATAGAGGAAGTAGCTAGGATTGAAGCTGAAGAAGCTGAGGTTTTGCTTGATGACTTGGGGATACCGTGTCCTTCTTCATCAAGAATTTCACCACGTGGAATATTTTGTAGCCGTACATTGAATTTACGGTCAATAAGTGCCATTGGATATGACATGGATTACACATTGATGCATTATAATGTGATGGCTTGGGAAGGAAAAGCGTATGACTACTGTATGAACAATTTGAAGAACATGGGTTTCCCTGTAGATGATCTTTCATTTGATCCTGACTTGGTTATAAGAGGCCTCGTCATAGACAAAGAGAGAGGTAATTTGGTTAAAGCAGATCGATTTGGTTATGTAATGAGGGCAATGCATGGAACCACAATGTTATCTACGCGAGAGATGAGTGAGATTTACGGGAGGGAGTTAGTGGATCTACGAAAGGAGAATCGATGGGAGTTCCTCAACACTTTCTTCTCTGTTTCTGAGGCTGTGGCATATATGCAGATGGTTGATAGATTGGACAACGGAGCCATAGCAGAACTTGGTCCTCTTGACTATAAAGGACTTTACAAGGCAGTTGGTAAAGCACTATTCAGAGCTCATGTTGAGGGACAACTTAAGAGTGAAATTATGTCAAAGCCCGAATTGTTTGTGGAACCTGATCCTGAACTACCTTTAGCTCTTCTGGATCAAAAAGAGTCAGGCAAAAAGCTTCTGCTCATTACCAACTCGGATTTTCATTACACAGATAAAATGATGCAACACTCTTTTAACAGATTCCTTCCAAATGATATGGGCTGGCGAGATCTATTTGATATTGTAATTGTCTCAGCTAGGAAGCCAGAGTTCTTTCAAATGTCACACCCAATGTATGAGGTAGTGACAGGTGAAGGTCTTATGCGCCCATGCTTCAAGGCTCGTGCAGGGGGTTTGTATTCAGGGGGCAGTGCACAGATGGTTGAGAATTCACTAAATATTCATGGAGATGAAATCTTATACGTTGGTGACCATATTTACACTGATGTAAGTCAATCAAAAGTCCATTTACGCTGGCGAACAGCACTGATATGTCGAGAATTGGAAGAAGAGTATAGTGCGCTGATTCGTAGCCGGGCTTATAGAGCATCACTAGTAGAACTTATAAATCAGAAAGAGGTTGTGGGAGATTCTTTCAACCAACTTCGACTGGCTTTGCAAAGGAGAATTAAAGACCGGCCTGCACAAACACTCCCAGCAACCAACATGGATGATGAGGAGCTTACAGAAAGGATGCAAAAGCTGCTGATAGTTATGCAAAGACTTGATGAGAAAATTGGTCCCATGCTAGAAAGAGACGGTGAGCACTTCAACAAAAGGTGGGGATTTCTTTCACGTGCAGGTCTTTGGGATAAAAGTCATTTGATGAGACAGATTGAAAAGTATGCTGACATATATACTTCAAGGGTCTCTAATTTCTTGCATTATACTCCATTCATGTATTTCCGCTCCCAAGAACAGGTAACATGTATGCGTTTGATTTGTATTTTCAGAGTTGGTAATTTGTTGATGCTGGCATTTGCCTGTTTTCTACTGCAGAACCTAGCCCATGACTCGCATTCATATTACAAACCACAGCCAAATGGACATGCTATCGACAACGAAGGCAACTAA 1941 42.09 YMLAFCVSFCSYRESSIAMAAANFLRYPVLMGAVSHPYSKKKMAQVCHCSLNSKAGDVFSVTSSSKCDVDYLGQSTKGDLNLKLEHLEAFGTDSEGSFHGPIEEVARIEAEEAEVLLDDLGIPCPSSSRISPRGIFCSRTLNLRSISAIGYDMDYTLMHYNVMAWEGKAYDYCMNNLKNMGFPVDDLSFDPDLVIRGLVIDKERGNLVKADRFGYVMRAMHGTTMLSTREMSEIYGRELVDLRKENRWEFLNTFFSVSEAVAYMQMVDRLDNGAIAELGPLDYKGLYKAVGKALFRAHVEGQLKSEIMSKPELFVEPDPELPLALLDQKESGKKLLLITNSDFHYTDKMMQHSFNRFLPNDMGWRDLFDIVIVSARKPEFFQMSHPMYEVVTGEGLMRPCFKARAGGLYSGGSAQMVENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICRELEEEYSALIRSRAYRASLVELINQKEVVGDSFNQLRLALQRRIKDRPAQTLPATNMDDEELTERMQKLLIVMQRLDEKIGPMLERDGEHFNKRWGFLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLHYTPFMYFRSQEQVTCMRLICIFRVGNLLMLAFACFLLQNLAHDSHSYYKPQPNGHAIDNEGN 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21247704 21254984 + Bpe018202.1 Bpe05g00790 104567

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00790 646 CDD HAD_cN-II 136 457 - -
Bpe05g00790 646 SUPERFAMILY HAD-like 132 597 IPR036412 -
Bpe05g00790 646 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 135 473 IPR008380 -
Bpe05g00790 646 Coils Coil 514 534 - -
Bpe05g00790 646 Gene3D - 295 484 IPR023214 -
Bpe05g00790 646 PANTHER HAD-SUPERFAMILY HYDROLASE, SUBFAMILY IG, 5'-NUCLEOTIDASE 52 629 - -
Bpe05g00790 646 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 52 629 IPR008380 -
Bpe05g00790 646 Pfam 5' nucleotidase family 135 597 IPR008380 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00790 - - - jre:108982508 979.163
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00661 Bpe-Chr1:4573533 Bpe05g00790 Bpe-Chr5:21247704 2.72E-46 dispersed
Bpe02g01689 Bpe-Chr2:19465798 Bpe05g00790 Bpe-Chr5:21247704 4.27E-62 dispersed
Bpe04g00213 Bpe-Chr4:1462151 Bpe05g00790 Bpe-Chr5:21247704 4.74E-38 dispersed
Bpe05g00790 Bpe-Chr5:21247704 Bpe08g00678 Bpe-Chr8:7459695 1.47E-45 dispersed
Bpe05g00790 Bpe-Chr5:21247704 Bpe05g00090 Bpe-Chr5:1558571 3.66E-68 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g266 Blo01g00017 . . . . . . Bma05g00981 . . . . . . . . . . . . . . . . Cla06g00386 . Cec06g0417 . . . . . Cone15ag0684 . . . . . . . . . . Bpe05g00790 . . . Sed11g1035 . . . . . . Cpe12g00353 . Bhi12g02006 Tan06g2823 Cmetu03g0819 Lac11g1075 Hepe03g0003 . Lcy12g0924 . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012890 1 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 28
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe05g00790 Bpe_Chr05 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0