Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00792 ATGGTGAGCCAGGAGCAGCAGGAGGAGAAAAAACACATTTCTAGTCATCGATTGATTCGAAAATTGGGAAAATACGAGCTCGGGACGACCCTGGGTGAAGGGAATTTCGGGAAGGTTAAGCTCGCCACGAATATTGAAACTGGCCGACCTTTCGCTATTAAGATTATCCAGAAGAAGAGAATCGTCGATCTCAACATTACCAATCAGATTAAGAGGGAAATAGCCACTCTGAAGCTTCTCAAACATCCTAATGTAGTCAAGCTACACGAGGTGTTGGCCAGTAAAACCAAGATTTACATAGTCCTGGAGTATGTGACTGGAGGGGAATTATTTGACAGAATTGCATTTAACGGGAAGCTAAAGGAGGACGAAGGCAGGAAGCTCTTCCAGCAATTAATTGACGGTGTGAGCTACTGTCACACCAAAGGTGTTTTCCACAGGGATCTCAAGTTAGAGAACTTACTTGTTGATGCCAACGGAAACCTCAAGATATCTGATTTCGGCCTTAGTGCGCTGCCTCAGCATGATGGATTACTTCACACAACCTGTGGAAGTCCAAATTATGTTGCACCTGAGATACTAGCAAACAGAGGGTATGATGGTGCCATCTCAGACGTATGGTCATGTGGTGTAATTTTGTATGTCATTCTTACGGGATCTCTCCCTTTTGATGATAGAAATCTTGTTGTACTTTATCACAAGATATTCAAGTGTGAAGTAAATTTACCCAAATGGCTGTCACCAGGAGCGCAAAACTTGATAAGAAGCATTCTTGATCCCAACCCCATTTCTCGGATTACAATTCCAGGTATTAAAGCAGACAAATGGTTTAAGAAAGACTACAACCCTACGGATCCTGAAGAGGAAGAAGAGGAGTACAATAACACTCACTCAAAATCCACAGCAATAAATGAAGGGGCATCTGAGGGTGAAAAGATTGAAAAATCTTCTACGTTCATAAATGCATTTCAGTTGATTGGAATGTCCTCGTGCCTTGATCTTTCAGGCTTCTTTGAGAAAGAGGATATTTGCGAGAGGAAGATCAGATTTACATCCAACCATTCCTCGACAGATCTTCTTGAGAGGATTGAGGATATTGTAACTGAGATGGGATTCGGTGTTCAAAAGAAAAATGGAAAGGTCAGTTTCATAGTTTTATCGACACTAGGAGATTATACAACCTTTGATCTATACAAATAA 1200 41.42 MVSQEQQEEKKHISSHRLIRKLGKYELGTTLGEGNFGKVKLATNIETGRPFAIKIIQKKRIVDLNITNQIKREIATLKLLKHPNVVKLHEVLASKTKIYIVLEYVTGGELFDRIAFNGKLKEDEGRKLFQQLIDGVSYCHTKGVFHRDLKLENLLVDANGNLKISDFGLSALPQHDGLLHTTCGSPNYVAPEILANRGYDGAISDVWSCGVILYVILTGSLPFDDRNLVVLYHKIFKCEVNLPKWLSPGAQNLIRSILDPNPISRITIPGIKADKWFKKDYNPTDPEEEEEEYNNTHSKSTAINEGASEGEKIEKSSTFINAFQLIGMSSCLDLSGFFEKEDICERKIRFTSNHSSTDLLERIEDIVTEMGFGVQKKNGKVSFIVLSTLGDYTTFDLYK 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21266905 21270099 + Bpe018205.1 Bpe05g00792 104569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00792 399 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Bpe05g00792 399 PANTHER CBL-INTERACTING PROTEIN KINASE 21 15 383 - -
Bpe05g00792 399 SMART serkin_6 25 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00792 399 CDD CIPK_C 321 379 - -
Bpe05g00792 399 Pfam NAF domain 318 376 IPR004041 GO:0007165
Bpe05g00792 399 PANTHER - 15 383 - -
Bpe05g00792 399 ProSiteProfiles Protein kinase domain profile. 25 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00792 399 SUPERFAMILY Protein kinase-like (PK-like) 22 291 IPR011009 -
Bpe05g00792 399 MobiDBLite consensus disorder prediction 283 310 - -
Bpe05g00792 399 Gene3D Kinase associated domain 1, KA1 321 390 - -
Bpe05g00792 399 Gene3D Phosphorylase Kinase; domain 1 18 111 - -
Bpe05g00792 399 Pfam Protein kinase domain 25 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe05g00792 399 ProSiteProfiles NAF domain profile. 315 339 IPR018451 GO:0007165
Bpe05g00792 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Bpe05g00792 399 Gene3D Transferase(Phosphotransferase) domain 1 112 320 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00792 Bpe-Chr5:21266905 Bpe11g00973 Bpe-Chr11:7228150 3.49E-150 dispersed
Bpe15g00375 Bpe-Chr15:15308459 Bpe05g00792 Bpe-Chr5:21266905 8.01E-60 dispersed
Bpe05g00792 Bpe-Chr5:21266905 Bpe01g00862 Bpe-Chr1:17657866 6.72E-143 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63362 PF00069 Pkinase 1.30E-71 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00792 K07198 - jre:108981583 563.148