Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00801 ATGGCGTCATCTCTGATTTTGAATCCAGTGATTAACTCTGACCGCTCACGTGAATCTTCCAGAAGGAAAAAAAAGAAGAAAACTCAAATGAACCTAGATCGCAATCGAGATCAGAGCAATATCAAATGGAAATCTGAAGTGCAGCAGCAAATCTACACGTCCAAGCTCGTTAAAGCGCTGAGCCAAGTGAGGCTCAGTCCCTCCGTTTCGTCTCCGAGCGAAGCTCCTCGGCTCGGCCAGGCTGTCCGCGAGGCCGCCGATGGAGTCTTAGCCGTTGCTGCGAAGGGGAAAACTCTATGGAGCCGATCGATCTTAACGAACAGTCTGAAGCTCAAATTCTCGAAGCGGAGAAGGCGAAGAGTCTCCTCCGCTGTGAATAACCGCTCAAAGAAACCGCGAGTGAGCGTTTGGCGTTTGAAAGGCAAGTCTCCACCTGCGGTTGAGAGAAGAGTTCGGCTTCTCGGACGTTTGGTTCCCGGTTGCAGGAAGCAACCGTGTCCGGTGATTCTAGAAGAAGCCACTGATTATATAGCCGCCCTCGAGATGCAGGTCCGAGCCATGACTGCTCTCGCACAGTTGCTCTCTGGTTCTGGTTCCTCCTCATCACCGCCAAGCTGA 618 52.1 MASSLILNPVINSDRSRESSRRKKKKKTQMNLDRNRDQSNIKWKSEVQQQIYTSKLVKALSQVRLSPSVSSPSEAPRLGQAVREAADGVLAVAAKGKTLWSRSILTNSLKLKFSKRRRRRVSSAVNNRSKKPRVSVWRLKGKSPPAVERRVRLLGRLVPGCRKQPCPVILEEATDYIAALEMQVRAMTALAQLLSGSGSSSSPPS 205
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21350249 21350866 + Bpe018214.1 Bpe05g00801 104578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00801 205 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 7 202 IPR044660 GO:0006355
Bpe05g00801 205 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 150 195 IPR036638 GO:0046983
Bpe05g00801 205 PANTHER TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 7 202 - -
Bpe05g00801 205 MobiDBLite consensus disorder prediction 1 39 - -
Bpe05g00801 205 CDD bHLH_AtIBH1_like 138 191 IPR044549 GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00801 Bpe-Chr5:21350249 Bpe14g01094 Bpe-Chr14:8166699 8.07E-78 dispersed
Bpe04g01121 Bpe-Chr4:9505572 Bpe05g00801 Bpe-Chr5:21350249 7.36E-85 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00801 - - vvi:100243127 220.32