Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00817 ATGGATAGTATGGTTCAAGGAATGCTTGTTGGTTCGGAGATTCATGGATTTCATACATTGAAAGACTTTGATATGAGAAACATTATGGATGAAGCAAAAATGAGATGGCTCCGGCCCAATGAAATTTATGCCATACTTTGTAATCACAGATACTTCAACATCAATGTCAAACCATTGAACTTGCCCCCGGTTTCCTTTAAGATCAAACTTTTTGTGTTATCTGCCTATTTTGATAGATTACTTTCACTAACTGAATCAGGTGGTACGATAAAATTATTTGATCGTAAGATGCTTAGGAACTTTAGGAAAGATGGTCATAACTGGAAAAAGAAAAAGGATGGGAAGACAGTCAAAGAAGCACATGAGCACCTAAAAGTTGGTAAGGAAGAAAGGATTCATGTATATTATGCACATGGACAGGATGCTCCAACCTTTGTCCGTCGGTGCTATTGGCTTCTTGATAAGAGTCTAGAACATATAGTTCTTGTTCATTACCGTGAAACACAAGAGGTTCGTTTTATATTTTTTTATCAACTGTTATTGAACTATGGCAAAGTCTGTTTTGACCAGCAGAATCGAGTTGCAGTGAATGATTCCACAAATGGAAATTTATTGGTGGAACGATCTACATTTGACGATATAAGTGGTTCAATTGGGAGATATAACACAAGTTATTTGGGTTCACCAAACAGCACCTACATATCTACAGCGGTTAGTCAATTGAATTCAAATGCACAGAAAGGGAATTTCATTGCAATGGCCTCCAATGATTCCTCAGGTATTGGGGGCCACGAGGGTTTGCAAAGTCAGGATAGTTTTGGGCGGTGGTTAAATATTTTGATTACTGGATTCTTTCATGACGAGTTTGCTCATCTAGCTAAATCCAGTTTGTTTTGTGTCTGCGGTGATGTTTGTATTCCTACAGAAGTTGTTCAACTTGGAGTATATCGGTGTCTGGTACCACCACATCCTCCTGGCTTTGTAAATCTCTATCTCAGTTTAGATGGTCAAAAACCAATCAGCCAAGTTCTGAATTTTGAGTATCACAGCAAATTACTGGATGGCTCAGAAGTTTGTTTAGAAGAAAAAGACAGATGGAAGGAGTTCAGCACGGACTTCGATGCCCAAGGTCAAGGAGTAATTCATTTATGTGCCATTCTGGGATATTCATGGGCTATACAGTTATTTGCTTGGTCAGGTTTAACATTGGATTTTCGGGATAAATTTGGATGGACAGCTCTTCACTGGGCAGCATATTGCGGCAGGGAGAAAATGGTTGCAGTTCTTCTATATGCTGGAGCAAAGCCGAACTTGGTCACAGACCCAACCCCAGAAAATCCTGGGGGATTCACAGCTGCTGATCTTGCATCGTCCAAGGGTCATGACGGCTTGGCTGCCTATCTTTCAGAAAAGGCTTTAGTATCACATTTTCAGGAAATGAGTATAGCTGGGAATATCAGTGGTACACTGCGAACCAGCACAACTGAGAAGGAGAGTGCAAACTCTGAGAACCTCCTAGAGGAGCAGCTATATATGAAAGATAGTCTGGCAGCTTACACAACAGCTGCCAATGCAGCAGCACGTATACAGGCTGCATTTCGTGAACATTCTTTCAAGCAAAGATCTAAAGATGTTCGGATTTCAAATCGAGAGATTGAAGCCCGCAATATTATTGCAGCAATGAAAATTCAGCATGCATTCCGTAATTATGAAATGCGACGGAAAATGGCAGCAGCTGCTCGTATACAACACAGATTCCGTACTTGGAAATTGCATAAAGATTTCCTTAACATGCGACGTCAAGCTATCAAAATTCAAGCTGCATTCCGAGGTTTTCATGTGTGGAGGCAATACCGTAAAATTGTTTGGTCGGTAGGAGTTCTCGAGAAAGTTATACTACGATGGCGATTGAAGAGAAAAGGCTTTCGTGGACTTCAAGTTGAACCCATCGAATCCCTTGCCGAGCAGAGACAGGAAAGTGATACGGAGGAGGATTTTTATCGCACGAGCCAGAAACTTGCAAGTGAACGTGTTGAGAGATCCGTAGTACGAGTTCAGGCCTTGTTTCGTTCAAAGAAAGCACAAGAAGATTACCAGAGGATGAAGATCGCCCATCTGGAAGCGAAGGTAAGTTATACACACAGGAGACGAATGCTAAAATCAACTTCGAATTAA 2175 41.1 MDSMVQGMLVGSEIHGFHTLKDFDMRNIMDEAKMRWLRPNEIYAILCNHRYFNINVKPLNLPPVSFKIKLFVLSAYFDRLLSLTESGGTIKLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGKEERIHVYYAHGQDAPTFVRRCYWLLDKSLEHIVLVHYRETQEVRFIFFYQLLLNYGKVCFDQQNRVAVNDSTNGNLLVERSTFDDISGSIGRYNTSYLGSPNSTYISTAVSQLNSNAQKGNFIAMASNDSSGIGGHEGLQSQDSFGRWLNILITGFFHDEFAHLAKSSLFCVCGDVCIPTEVVQLGVYRCLVPPHPPGFVNLYLSLDGQKPISQVLNFEYHSKLLDGSEVCLEEKDRWKEFSTDFDAQGQGVIHLCAILGYSWAIQLFAWSGLTLDFRDKFGWTALHWAAYCGREKMVAVLLYAGAKPNLVTDPTPENPGGFTAADLASSKGHDGLAAYLSEKALVSHFQEMSIAGNISGTLRTSTTEKESANSENLLEEQLYMKDSLAAYTTAANAAARIQAAFREHSFKQRSKDVRISNREIEARNIIAAMKIQHAFRNYEMRRKMAAAARIQHRFRTWKLHKDFLNMRRQAIKIQAAFRGFHVWRQYRKIVWSVGVLEKVILRWRLKRKGFRGLQVEPIESLAEQRQESDTEEDFYRTSQKLASERVERSVVRVQALFRSKKAQEDYQRMKIAHLEAKVSYTHRRRMLKSTSN 724
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 21459888 21466893 - Bpe018229.2 Bpe05g00817 104594
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00817 724 Gene3D Immunoglobulins 270 350 IPR013783 -
Bpe05g00817 724 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 6 278 371 - -
Bpe05g00817 724 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 6 371 714 - -
Bpe05g00817 724 Gene3D - 351 472 IPR036770 -
Bpe05g00817 724 Gene3D - 574 622 - -
Bpe05g00817 724 ProSiteProfiles IQ motif profile. 679 707 IPR000048 GO:0005515
Bpe05g00817 724 ProSiteProfiles IQ motif profile. 598 622 IPR000048 GO:0005515
Bpe05g00817 724 Pfam CG-1 domain 87 167 IPR005559 GO:0003677
Bpe05g00817 724 ProSiteProfiles IQ motif profile. 559 585 IPR000048 GO:0005515
Bpe05g00817 724 SMART iq_5 597 619 IPR000048 GO:0005515
Bpe05g00817 724 SMART iq_5 555 577 IPR000048 GO:0005515
Bpe05g00817 724 SMART iq_5 677 699 IPR000048 GO:0005515
Bpe05g00817 724 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 17 172 - -
Bpe05g00817 724 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 278 371 - -
Bpe05g00817 724 ProSiteProfiles Ankyrin repeat region circular profile. 409 437 - -
Bpe05g00817 724 ProSiteProfiles Ankyrin repeat profile. 409 441 IPR002110 GO:0005515
Bpe05g00817 724 SMART ANK_2a 448 477 IPR002110 GO:0005515
Bpe05g00817 724 SMART ANK_2a 409 438 IPR002110 GO:0005515
Bpe05g00817 724 Pfam Ankyrin repeats (3 copies) 371 438 IPR002110 GO:0005515
Bpe05g00817 724 SUPERFAMILY Ankyrin repeat 373 471 IPR036770 -
Bpe05g00817 724 SMART CG_1_2 28 169 IPR005559 GO:0003677
Bpe05g00817 724 ProSiteProfiles CG-1 DNA-binding domain profile. 25 174 IPR005559 GO:0003677
Bpe05g00817 724 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 371 714 - -
Bpe05g00817 724 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 6 17 172 - -
Bpe05g00817 724 SUPERFAMILY E set domains 278 348 IPR014756 -
Bpe05g00817 724 ProSiteProfiles IQ motif profile. 522 551 IPR000048 GO:0005515
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bpe04g01108 Bpe05g00817 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00817 Bpe-Chr5:21459888 Bpe05g00947 Bpe-Chr5:22392835 8.63E-07 dispersed
Bpe04g01108 Bpe-Chr4:8924832 Bpe05g00817 Bpe-Chr5:21459888 5.54E-31 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00817 K21596 - twl:119997831 505.753