Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00823 ATGAATCTGAATCACGCCAAGGCATCGATGCCTACAGCTATTTGTAGTGCTGCTCTTAAATCCGGCGAAGTTGTTTCCGACCAATTTCCGGCTGGTCTACGAGTTCTGGTCGTCGATGACGATCCGACCTGCCTGAGAATCTTGGATAAGATGCTTCAATTTTGTCTCTACCACGTTTCTATGTGCAATCGAGCCGAGACTGCATTGTCTAAGCTTCGAGATAACAAAAATGGATTCGATATCGTGATTAGTGACGTCCATATGCCGGACATGGATGGATTTAAGCTCTTAGAGCACATTGGCCTAGAAATGGACCTACCAGTTATCATGATGTCTGCCGATGAAAGCAAAGATGTTGTCATGAAGGGAGTTACTCACGGAGCTTGCGATTATTTAATAAAACCTGTTCGAATTGAAGCTTTGAAGAACATATGGCAACATGTAGTTCGGAGGAGGAAGAATGAGTGGAAGGATCTAGAACAATCCGGAAGTGTGGAAGACGGGGATCGGCAACCAAAACCGTGCGATGACGCGGATTACTCGTCCTCATTAAATGATGGAAATTGCAAAAGCTCGAAGAGGAGGAAAGATGATGAAGAAGAAGCTGAGGAACGAGATGATTCGTCGACGTTGAAGAAGCCACGTGTGGTTTGGTCGGTCGAGCTTCATCAGCAGTTTGTCGCAGCTGTTAATCAACTCGGCATTGACAAGGCTGTTCCTAAGAAAATTTTGGAGCTGATGAATGTTCCGGGACTTACTAGAGAAAATGTTGCCAGTCATCTTCAGAAATATCGGTTGTATCTAAGAAGGCTAAGTGGAGTCACACAACACCCTAGTAATTTGAACAATTCCTTCATCAACCCACAAGAAGCAATTTTCGGTCCAGTTTCAGCAATCAACGAGATCAATCTTCAGGCTCTAGCCGTAACTGGAAAACTCACACTCCAAAGTCTTGCCTCGCTTCAAGCTGCCGGCCCGAGTAGATCTTCTTCATCAAAATCCGGCGTAATTTCCAATCAGAGGAACATATTTAGCTTTGAGAATCCGAAACTGAGATTTGGTGAGGCCCAGCCTCAGCATCTCAACAGTCGTAAACCAATAAATTTACTGCATGGAATTCCCACCACCATGGAAGCAAAGCAGCTTGCAAATTTGAACCATGGAAGCATAAATACGCAAGGTAATATCCATGGAGGCCAAAACAACTCTTTATTAACCCAGATGACTCAACCTCAATCATCAATCGGACAGTCTGTTAGAATTCCAGGTGGGGTTCCGACGAACAATCTGATTCCGCCGGAATCATCTATCTTCAGTTTTCCGGCAAACCAAACAGCTGAATTCCCAGGAAATAATTTGCCTCTTCAAACGGCTCCATCTAAAGGGCCATTCTTGGAAGAATCAAATCTAGAAACAAAACAATCAGGAAGATTTGTATCAAATTATGATATATTCGATGATTTGCAGAATCCCAGTTTGAACTTCAATATCTCATCTTTGGGTTTATATCATCAAAACTTTCCCTCCAGCCAAAGGATCAGACAAGATAGCGATGTTTCTACAACTCGACCTGAGAACGGACAGGTCATCGGACAGCAACTAAATTCTGTTCTTTTTGACAATCCGGTGAGGGTTAAAGCCGAGACAATCCCAGATCCAAGCTGCATCTTATTCCCTGAAAGCTTCGTTCGGGAAGATCTAATGAGTACCCTTTTCAGACAAGTTAGTTTCCTACAACTTTTCTTCTCTGTTTGTTTTCGATGA 1764 43.31 MNLNHAKASMPTAICSAALKSGEVVSDQFPAGLRVLVVDDDPTCLRILDKMLQFCLYHVSMCNRAETALSKLRDNKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADESKDVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRRRKNEWKDLEQSGSVEDGDRQPKPCDDADYSSSLNDGNCKSSKRRKDDEEEAEERDDSSTLKKPRVVWSVELHQQFVAAVNQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVTQHPSNLNNSFINPQEAIFGPVSAINEINLQALAVTGKLTLQSLASLQAAGPSRSSSSKSGVISNQRNIFSFENPKLRFGEAQPQHLNSRKPINLLHGIPTTMEAKQLANLNHGSINTQGNIHGGQNNSLLTQMTQPQSSIGQSVRIPGGVPTNNLIPPESSIFSFPANQTAEFPGNNLPLQTAPSKGPFLEESNLETKQSGRFVSNYDIFDDLQNPSLNFNISSLGLYHQNFPSSQRIRQDSDVSTTRPENGQVIGQQLNSVLFDNPVRVKAETIPDPSCILFPESFVREDLMSTLFRQVSFLQLFFSVCFR 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21502106 21504695 - Bpe018236.1 Bpe05g00823 104600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00823 587 CDD REC_typeB_ARR-like 35 149 - -
Bpe05g00823 587 MobiDBLite consensus disorder prediction 189 210 - -
Bpe05g00823 587 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 213 266 IPR006447 GO:0003677
Bpe05g00823 587 SUPERFAMILY Homeodomain-like 210 270 IPR009057 -
Bpe05g00823 587 SMART REC_2 33 145 IPR001789 GO:0000160
Bpe05g00823 587 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 416 - -
Bpe05g00823 587 Gene3D - 33 166 - -
Bpe05g00823 587 Pfam Response regulator receiver domain 35 143 IPR001789 GO:0000160
Bpe05g00823 587 Gene3D - 210 272 - -
Bpe05g00823 587 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 416 IPR045279 GO:0009736
Bpe05g00823 587 MobiDBLite consensus disorder prediction 156 210 - -
Bpe05g00823 587 Pfam Myb-like DNA-binding domain 215 265 IPR001005 -
Bpe05g00823 587 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 212 269 IPR017930 -
Bpe05g00823 587 MobiDBLite consensus disorder prediction 156 176 - -
Bpe05g00823 587 SUPERFAMILY CheY-like 32 156 IPR011006 -
Bpe05g00823 587 ProSiteProfiles Response regulatory domain profile. 34 149 IPR001789 GO:0000160
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01103 Bpe05g00823 CCT
Bpe04g01103 Bpe05g00823 ECH
Bpe05g00823 Bpe13g00682 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01970 Bpe-Chr2:21547512 Bpe05g00823 Bpe-Chr5:21502106 7.84E-124 dispersed
Bpe05g00823 Bpe-Chr5:21502106 Bpe08g00654 Bpe-Chr8:6676192 2.98E-108 dispersed
Bpe13g00682 Bpe-Chr13:13506862 Bpe05g00823 Bpe-Chr5:21502106 0 wgd
Bpe04g01103 Bpe-Chr4:8822631 Bpe05g00823 Bpe-Chr5:21502106 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21476 PF00072 Response_reg 3.50E-22 CL0304 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00823 - K14491 tcc:18603588 699.123