Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe05g00827 ATGACGTTCGGAGGTTTTAACAATGCCGACAAAGACAAGAAGAAGAAGAAGATCGCCGTTATCGGCGTCTCTTCTCTTATTTTGGTAGCTATGGTTGTCGCCGTTGCCGTCGGCGTTGGCCGTGGCTCCGGCCAATCTTCGACAGCCGAAAGTTCTCCTCCCGCCGCGGAACAAGTTTCCACGTCGGAGAAGGCGATCAAGGCAATCTGTCAGCCTACGGATTACCGAGAGACCTGCGAGGAAAGCCTTTCAGCTGCCGCCGGAAATACCAGCGACCCGAAAGAGCTCGTAAAAGCTGGATTTAAGGTCGCCATTAGTGAGCTAACAGCCGCCATTAGGAACTCGACGACCTTGCAAGAGCTTGCAAAAGAACCAAGAACTAATCAGGCTCTTCAAAACTGTCGCGAGCTGATCCAATACGCCATCGACGACCTCAACGAATCTTTCACAAGAATCGGAGCCTTCGAGATAGCCAAACTCGATGACTACATCGCGGACCTAGAAGTCTGGCTGAGCGCCTCCCTCACATACGAGCAGACATGCTTGGACGGATTCGAAAACACCACCGGCGACGCAGGAGAGCAGATGAAGAAAATTCTGAAAAAATCGCAGCAGCTTACCAGCAATGGGTTGGCAATGGTGACGGAAATCTCCTCCATTTTGGCCTCCTTCCAGATACCCACAACAAGCAGAAGGCTTCTCACGGAAAACAGCAGCGAGGAGCCGGCGTGGGTGGACCAGGGAAAGAGGATCCTTTTGCAGGCGACTCCGGCGACCGTGAAAGCAGACGTGGTGGTGGCGAAGGATGGAAGTGGGAAGTATAAGACAGTGAACGAGGCGTTGAAGGACATACCGGAGAAGAATACCAAGACTTTTGTGATCTACGTGAAAGCCGGAGTTTACAACGAGAATGTGATGATCGATAAGGGTATGACCCATGTTATGCTGATCGGAGATGGACCGACCGCCACTAAAATTACCGGCAGTAAGAATTTTATTGACGGAACTCCTACGTTCAAGACTGCAACTGTTTCTGTGATCGGAAACAATTTCATTGCCAAGAACATCGGATTCGAGAATTCCGCCGGAGCAGAAAAGCACCAAGCGGTGGCGCTCCGAGTTCAGTCCGACATGTCCATCTTCTACAACTGCCAAATGGACGGATATCAAGACACTCTCTACACCCACACTAACCGCCAATTCTACCGTGACTGCACAATCTCCGGCACCATAGACTTCATCTTCGGCAACGGCGCCGTCGTTCTACAGAACTGCAAAATGGTCGTCCGGAAGCCACTGGAGAACCAGCAGTGCATCGTCACCGCTCAGGGAAGACTCGACCGGCGAGAACCCACCGCTCTGATTCTCCAAAACTGCACCATCACTTCCGACCCAGCTTACTACCCTTTCCGCATTCAAAACAAAGCTTACCTCGGTCGGCCATGGAAAGAGTATTCAAGAACCATAATCATGCAGTCTCAGATAGACAATCTGATTCAGCCAGATGGATGGTTGCCATGGATGGGAGATTTCGCTCTGAAAACTTGCTTCTACGCGGAGGTTGATAATCGAGGCCCTGGTTCAGTGCAAACAAACAGAGTGAAATGGAGAGGAATCAAGAAGATAACTTCTCAACATGCAGTGAAGTTCACAGCAGAAAGGTTCATTCAGGGAAATCAATGGATAAAGGCCGCCGGAGTGCCTTATTCTCCCGGAATGATAGCCCCCAAATGTTTTCGTACTGATAATCAATCTTTGTCAAAATGCGCGGTGGGTATTCCGAAGATGACTAACACCGGAGAAGATTCCAGTAGTCGGGGCGGTGGACTCGGTGGATTACATTCCGTACATCCTGAACGGGACCTGGAATCGAATTGGGAAGTTGATCTTGCCAAGAAGCTTGAAGAATATTTGTTGAAAATTTGCTCTGGTGAGATTCATCCCGATGAGGACGACAGTCAACTCGCTGTAAATTTCGCGGAAGCTGCTCTTCTTCTTCAAGGTTCTGTTCAGGTGTATAGTAGAAAGGTGGAATATTTGTATTCACTGGTTCTGCGTGCTTTGGAGTTCCTTTCTCAGAATAGTAGGAAACAAGACCAGGCAAAGGATATATCAGCCCAATCCGAAGGAGGTGTTTCCCCTACCGATGCAGATGATGATAATGACCTATTTTGGTGTTTAGATGATATCCCTGTGGAAGCAAAGAATTGCATTGATTGTTCAGGAGGTAACGACAATCCTCTGTATCAATTTGTGAAACCACCTGCAAATTTAGTTGTTCTTGAAGGTGACTGCTTTGATGCTACTGGTGATGGCACAGAATTAGAGTCATATCTGCTGGCCACGAATGACCAATACCAGGATTTTATTCTCTTAGATCCATGCGACGAGGTAGTTGTTGAAGATTTTCTAAAAGGAGATAAAATTAGTAAAGGTAAAAGTAGAGCATATGGGGGTAGCTCAGCTTGTAAAAGTTTCCAATCTCCAACAAGACGTTCAGGTGACAGTTCAAGAAAGTCCGCTTCAGGGAAAAAACAAGATGTTCGCATCCTTCCATCTCCTAGGATGGATTGTCCTGCCGAGGTTAATAACCATAATGATGGGCCCAATCCTCCTGACTTTGGTGACTTTCATGATATGGATTTTGGATTCGGTAATGATGACACATCTTGCAGACCTTGTAACTCAGACGATTCAGATGACGACGGTGATCCTTGGAAGCCTTTGAACCCACACGAACCAGGGAATTTGAAAATCAAACCTTTTAGAAAAGCAGTGAAAGCTTCTAAACGAATTAACGCGGATGCTGCTAAGCGGGCATCAATTAGTGTATTGTTTCCACTAGCCAAGTTATACGGTACCATTAGTCCAGAGTTCACAAAAATGTGGGAGAGCAGGCATCAAGCTCGTGAAAGACAAGAAGAGAACCCTTCATTATATGAAAAGCTGAGACATTCTCTTGTGAATGGAGCGCGTGAAACTTGTTCTAATTTCTGTGACCCAGATGGGGAAAATGAGAACAAAGAAGATTATGACGGGAACGATGGTTTTGGTGGACCAGATTTTGATATGCCTGAAAACACTTGTATGGATGAAGGCCCACCGAGCCAAAATGAAAAGCATGATAACAATGAATCCTTAGAACACGAATGTCCTGATTCTCATATAAACCTTGAAGATCTTTGCCGCTCTCATCTAGACGCACTGCTTGCTAACATAACTGAGCCTGACACGCAAACAGAATTAGCTATTCGGGTATCTACATGGAAACAGAGAATAGAGCATAGTTTGGAAGAACAGGAACTATGCCCTGCATTTGACATTCACAAATACGGTGAGAATATTCTGCAAAAACTATCTGATGAAGCAGATGAAGAAAAAATATTGTCTTTTTCTGATGTTGTCAAGGAGCAGGAAAAGTATGAAGTGGCTCGAAGCTTTGCTGCGCTTCTCCAACTGGTTAACAATGGAGATGTTGAGCTGAATCCAAGTGGGGTCAATCTGGAGTTCATCGGCCATATGGCAGCGGATCCTTTCCATATTCGGCTGCTTAACCGTGCAAAACCATCTGACAAAAAACAGCTTCAAGATTCGAGAAAAAGGGTCACTTCTCCATTCAGGAGAGTAAACACCAAATTTGAGAACAAAAAAGCTATTAAAGAAAGGAAGTTATCATCTCAAGTTGAATCAAAGTGCCCTTCAAAGATTGGTGGGGGCGTTAGGTGCACTCCAGATGGCAAAAGGAGACGAAGATCTCGACATGTTGAGCCGCTCAATATCCATTTGGCCGGATGA 3795 46.25 MTFGGFNNADKDKKKKKIAVIGVSSLILVAMVVAVAVGVGRGSGQSSTAESSPPAAEQVSTSEKAIKAICQPTDYRETCEESLSAAAGNTSDPKELVKAGFKVAISELTAAIRNSTTLQELAKEPRTNQALQNCRELIQYAIDDLNESFTRIGAFEIAKLDDYIADLEVWLSASLTYEQTCLDGFENTTGDAGEQMKKILKKSQQLTSNGLAMVTEISSILASFQIPTTSRRLLTENSSEEPAWVDQGKRILLQATPATVKADVVVAKDGSGKYKTVNEALKDIPEKNTKTFVIYVKAGVYNENVMIDKGMTHVMLIGDGPTATKITGSKNFIDGTPTFKTATVSVIGNNFIAKNIGFENSAGAEKHQAVALRVQSDMSIFYNCQMDGYQDTLYTHTNRQFYRDCTISGTIDFIFGNGAVVLQNCKMVVRKPLENQQCIVTAQGRLDRREPTALILQNCTITSDPAYYPFRIQNKAYLGRPWKEYSRTIIMQSQIDNLIQPDGWLPWMGDFALKTCFYAEVDNRGPGSVQTNRVKWRGIKKITSQHAVKFTAERFIQGNQWIKAAGVPYSPGMIAPKCFRTDNQSLSKCAVGIPKMTNTGEDSSSRGGGLGGLHSVHPERDLESNWEVDLAKKLEEYLLKICSGEIHPDEDDSQLAVNFAEAALLLQGSVQVYSRKVEYLYSLVLRALEFLSQNSRKQDQAKDISAQSEGGVSPTDADDDNDLFWCLDDIPVEAKNCIDCSGGNDNPLYQFVKPPANLVVLEGDCFDATGDGTELESYLLATNDQYQDFILLDPCDEVVVEDFLKGDKISKGKSRAYGGSSACKSFQSPTRRSGDSSRKSASGKKQDVRILPSPRMDCPAEVNNHNDGPNPPDFGDFHDMDFGFGNDDTSCRPCNSDDSDDDGDPWKPLNPHEPGNLKIKPFRKAVKASKRINADAAKRASISVLFPLAKLYGTISPEFTKMWESRHQARERQEENPSLYEKLRHSLVNGARETCSNFCDPDGENENKEDYDGNDGFGGPDFDMPENTCMDEGPPSQNEKHDNNESLEHECPDSHINLEDLCRSHLDALLANITEPDTQTELAIRVSTWKQRIEHSLEEQELCPAFDIHKYGENILQKLSDEADEEKILSFSDVVKEQEKYEVARSFAALLQLVNNGDVELNPSGVNLEFIGHMAADPFHIRLLNRAKPSDKKQLQDSRKRVTSPFRRVNTKFENKKAIKERKLSSQVESKCPSKIGGGVRCTPDGKRRRRSRHVEPLNIHLAG 1264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21532637 21538853 + Bpe018240.1 Bpe05g00827 104604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe05g00827 1264 MobiDBLite consensus disorder prediction 820 836 - -
Bpe05g00827 1264 MobiDBLite consensus disorder prediction 813 916 - -
Bpe05g00827 1264 MobiDBLite consensus disorder prediction 1035 1050 - -
Bpe05g00827 1264 Gene3D Invertase/pectin methylesterase inhibitor family protein 60 218 IPR035513 -
Bpe05g00827 1264 ProSitePatterns Pectinesterase signature 1. 288 307 IPR018040 -
Bpe05g00827 1264 SUPERFAMILY Pectin lyase-like 258 572 IPR011050 -
Bpe05g00827 1264 Gene3D Structural maintenance of chromosome 1. Chain E 1107 1163 IPR023093 -
Bpe05g00827 1264 Pfam Plant invertase/pectin methylesterase inhibitor 65 213 IPR006501 GO:0004857
Bpe05g00827 1264 CDD PMEI-like_3 68 219 - -
Bpe05g00827 1264 MobiDBLite consensus disorder prediction 597 616 - -
Bpe05g00827 1264 MobiDBLite consensus disorder prediction 1224 1264 - -
Bpe05g00827 1264 PANTHER PECTINESTERASE 19 607 - -
Bpe05g00827 1264 MobiDBLite consensus disorder prediction 893 908 - -
Bpe05g00827 1264 Pfam Condensin II complex subunit CAP-H2 or CNDH2, C-term 905 1191 IPR031737 -
Bpe05g00827 1264 ProSitePatterns Pectinesterase signature 2. 407 416 IPR033131 -
Bpe05g00827 1264 Gene3D - 257 573 IPR012334 -
Bpe05g00827 1264 Pfam Condensin II complex subunit CAP-H2 or CNDH2, mid domain 753 902 IPR031719 -
Bpe05g00827 1264 MobiDBLite consensus disorder prediction 998 1050 - -
Bpe05g00827 1264 Pfam Condensin II complex subunit CAP-H2 or CNDH2, N-terminal 614 730 IPR009378 -
Bpe05g00827 1264 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 64 218 IPR035513 -
Bpe05g00827 1264 SMART PMEI_2 61 213 IPR006501 GO:0004857
Bpe05g00827 1264 Pfam Pectinesterase 263 559 IPR000070 GO:0030599|GO:0042545
Bpe05g00827 1264 PANTHER PECTINESTERASE 19 607 - -
Bpe05g00827 1264 TIGRFAM PME_inhib: pectinesterase inhibitor domain 56 216 IPR006501 GO:0004857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00209 Bpe-Chr5:13344035 Bpe05g00827 Bpe-Chr5:21532637 0 dispersed
Bpe05g00827 Bpe-Chr5:21532637 Bpe13g01298 Bpe-Chr13:18131672 2.27E-163 dispersed
Bpe05g00827 Bpe-Chr5:21532637 Bpe13g01126 Bpe-Chr13:16828866 8.05E-174 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe05g00827 K01051 - mnt:21390602 805.053